Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim36Q80WG7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trim36Q80WG7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
Trim36Q80WG7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim36Q80WG7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim36Q80WG7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Trim36Q80WG7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim36Q80WG7 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim36Q80WG7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Trim36Q80WG7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim36Q80WG7 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.49■□□□□ 0.71
Trim36Q80WG7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Trim36Q80WG7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim36Q80WG7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim36Q80WG7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim36Q80WG7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim36Q80WG7 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.48■□□□□ 0.71
Trim36Q80WG7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim36Q80WG7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim36Q80WG7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim36Q80WG7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim36Q80WG7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim36Q80WG7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim36Q80WG7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim36Q80WG7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim36Q80WG7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim36Q80WG7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim36Q80WG7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim36Q80WG7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim36Q80WG7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim36Q80WG7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim36Q80WG7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim36Q80WG7 Etf1-202ENSMUST00000180351 108 ntBASIC19.46■□□□□ 0.71
Trim36Q80WG7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.46■□□□□ 0.71
Trim36Q80WG7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Trim36Q80WG7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim36Q80WG7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim36Q80WG7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim36Q80WG7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim36Q80WG7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim36Q80WG7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Trim36Q80WG7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim36Q80WG7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim36Q80WG7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim36Q80WG7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Trim36Q80WG7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim36Q80WG7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim36Q80WG7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim36Q80WG7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Trim36Q80WG7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim36Q80WG7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trim36Q80WG7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim36Q80WG7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim36Q80WG7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim36Q80WG7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trim36Q80WG7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim36Q80WG7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim36Q80WG7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim36Q80WG7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim36Q80WG7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim36Q80WG7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim36Q80WG7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim36Q80WG7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim36Q80WG7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim36Q80WG7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim36Q80WG7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim36Q80WG7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim36Q80WG7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim36Q80WG7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.42■□□□□ 0.7
Trim36Q80WG7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim36Q80WG7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trim36Q80WG7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim36Q80WG7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim36Q80WG7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
Trim36Q80WG7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim36Q80WG7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim36Q80WG7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim36Q80WG7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.42■□□□□ 0.7
Trim36Q80WG7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim36Q80WG7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim36Q80WG7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
Trim36Q80WG7 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.42■□□□□ 0.7
Trim36Q80WG7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim36Q80WG7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim36Q80WG7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trim36Q80WG7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trim36Q80WG7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim36Q80WG7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim36Q80WG7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim36Q80WG7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim36Q80WG7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.41■□□□□ 0.7
Trim36Q80WG7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trim36Q80WG7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.41■□□□□ 0.7
Trim36Q80WG7 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.41■□□□□ 0.7
Trim36Q80WG7 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.41■□□□□ 0.7
Trim36Q80WG7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.41■□□□□ 0.7
Trim36Q80WG7 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim36Q80WG7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Trim36Q80WG7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim36Q80WG7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms