Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn4bQ7M729 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn4bQ7M729 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Scn4bQ7M729 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scn4bQ7M729 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scn4bQ7M729 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scn4bQ7M729 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.79■□□□□ 0.76
Scn4bQ7M729 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn4bQ7M729 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Scn4bQ7M729 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn4bQ7M729 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn4bQ7M729 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn4bQ7M729 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn4bQ7M729 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn4bQ7M729 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scn4bQ7M729 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Scn4bQ7M729 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn4bQ7M729 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn4bQ7M729 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn4bQ7M729 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn4bQ7M729 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.78■□□□□ 0.76
Scn4bQ7M729 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn4bQ7M729 Etf1-202ENSMUST00000180351 108 ntBASIC19.78■□□□□ 0.76
Scn4bQ7M729 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn4bQ7M729 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn4bQ7M729 Gm9959-201ENSMUST00000068277 390 ntBASIC19.78■□□□□ 0.76
Scn4bQ7M729 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn4bQ7M729 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn4bQ7M729 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn4bQ7M729 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scn4bQ7M729 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn4bQ7M729 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn4bQ7M729 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Scn4bQ7M729 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn4bQ7M729 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Scn4bQ7M729 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn4bQ7M729 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn4bQ7M729 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scn4bQ7M729 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn4bQ7M729 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Scn4bQ7M729 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Scn4bQ7M729 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn4bQ7M729 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scn4bQ7M729 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scn4bQ7M729 Rps24-207ENSMUST00000224568 714 ntBASIC19.76■□□□□ 0.75
Scn4bQ7M729 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn4bQ7M729 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn4bQ7M729 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn4bQ7M729 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn4bQ7M729 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn4bQ7M729 Gm7417-201ENSMUST00000192950 473 ntBASIC19.75■□□□□ 0.75
Scn4bQ7M729 Gm45102-201ENSMUST00000207427 857 ntBASIC19.75■□□□□ 0.75
Scn4bQ7M729 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.75■□□□□ 0.75
Scn4bQ7M729 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn4bQ7M729 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn4bQ7M729 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Scn4bQ7M729 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn4bQ7M729 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Scn4bQ7M729 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn4bQ7M729 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn4bQ7M729 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.74■□□□□ 0.75
Scn4bQ7M729 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn4bQ7M729 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scn4bQ7M729 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn4bQ7M729 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Scn4bQ7M729 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scn4bQ7M729 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scn4bQ7M729 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Scn4bQ7M729 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn4bQ7M729 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn4bQ7M729 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scn4bQ7M729 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn4bQ7M729 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn4bQ7M729 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn4bQ7M729 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn4bQ7M729 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn4bQ7M729 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scn4bQ7M729 Gm7143-201ENSMUST00000222811 859 ntBASIC19.72■□□□□ 0.75
Scn4bQ7M729 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.72■□□□□ 0.75
Scn4bQ7M729 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn4bQ7M729 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.72■□□□□ 0.75
Scn4bQ7M729 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn4bQ7M729 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn4bQ7M729 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn4bQ7M729 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.71■□□□□ 0.75
Scn4bQ7M729 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn4bQ7M729 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn4bQ7M729 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Scn4bQ7M729 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Scn4bQ7M729 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn4bQ7M729 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn4bQ7M729 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Scn4bQ7M729 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn4bQ7M729 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn4bQ7M729 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn4bQ7M729 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn4bQ7M729 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn4bQ7M729 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn4bQ7M729 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Scn4bQ7M729 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms