Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Ubfd1Q78JW9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubfd1Q78JW9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubfd1Q78JW9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubfd1Q78JW9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Ubfd1Q78JW9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubfd1Q78JW9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ubfd1Q78JW9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Ubfd1Q78JW9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ubfd1Q78JW9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ubfd1Q78JW9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.83■□□□□ 0.77
Ubfd1Q78JW9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ubfd1Q78JW9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Ubfd1Q78JW9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.83■□□□□ 0.77
Ubfd1Q78JW9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ubfd1Q78JW9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.83■□□□□ 0.77
Ubfd1Q78JW9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.83■□□□□ 0.77
Ubfd1Q78JW9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ubfd1Q78JW9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Ubfd1Q78JW9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.83■□□□□ 0.77
Ubfd1Q78JW9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.83■□□□□ 0.77
Ubfd1Q78JW9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ubfd1Q78JW9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ubfd1Q78JW9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.82■□□□□ 0.76
Ubfd1Q78JW9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Ubfd1Q78JW9 Gm8493-201ENSMUST00000196881 489 ntBASIC19.82■□□□□ 0.76
Ubfd1Q78JW9 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.82■□□□□ 0.76
Ubfd1Q78JW9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Ubfd1Q78JW9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ubfd1Q78JW9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ubfd1Q78JW9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ubfd1Q78JW9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ubfd1Q78JW9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ubfd1Q78JW9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ubfd1Q78JW9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ubfd1Q78JW9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ubfd1Q78JW9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ubfd1Q78JW9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ubfd1Q78JW9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ubfd1Q78JW9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ubfd1Q78JW9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ubfd1Q78JW9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.8■□□□□ 0.76
Ubfd1Q78JW9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ubfd1Q78JW9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ubfd1Q78JW9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ubfd1Q78JW9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.8■□□□□ 0.76
Ubfd1Q78JW9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.8■□□□□ 0.76
Ubfd1Q78JW9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ubfd1Q78JW9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ubfd1Q78JW9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ubfd1Q78JW9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
Ubfd1Q78JW9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ubfd1Q78JW9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Ubfd1Q78JW9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ubfd1Q78JW9 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.79■□□□□ 0.76
Ubfd1Q78JW9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ubfd1Q78JW9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubfd1Q78JW9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ubfd1Q78JW9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubfd1Q78JW9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubfd1Q78JW9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ubfd1Q78JW9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubfd1Q78JW9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ubfd1Q78JW9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ubfd1Q78JW9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ubfd1Q78JW9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.77■□□□□ 0.76
Ubfd1Q78JW9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ubfd1Q78JW9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ubfd1Q78JW9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ubfd1Q78JW9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ubfd1Q78JW9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ubfd1Q78JW9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ubfd1Q78JW9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ubfd1Q78JW9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Ubfd1Q78JW9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubfd1Q78JW9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ubfd1Q78JW9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubfd1Q78JW9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ubfd1Q78JW9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubfd1Q78JW9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubfd1Q78JW9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubfd1Q78JW9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.76■□□□□ 0.75
Ubfd1Q78JW9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubfd1Q78JW9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubfd1Q78JW9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ubfd1Q78JW9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubfd1Q78JW9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubfd1Q78JW9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ubfd1Q78JW9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ubfd1Q78JW9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ubfd1Q78JW9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ubfd1Q78JW9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ubfd1Q78JW9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ubfd1Q78JW9 Spcs1-204ENSMUST00000226782 949 ntBASIC19.75■□□□□ 0.75
Ubfd1Q78JW9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ubfd1Q78JW9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ubfd1Q78JW9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ubfd1Q78JW9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ubfd1Q78JW9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ubfd1Q78JW9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms