Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Kdm1aQ6ZQ88 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Kdm1aQ6ZQ88 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Kdm1aQ6ZQ88 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Kdm1aQ6ZQ88 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Kdm1aQ6ZQ88 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Kdm1aQ6ZQ88 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Kdm1aQ6ZQ88 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Kdm1aQ6ZQ88 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.48■■□□□ 1.19
Kdm1aQ6ZQ88 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Kdm1aQ6ZQ88 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Kdm1aQ6ZQ88 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Kdm1aQ6ZQ88 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Kdm1aQ6ZQ88 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Kdm1aQ6ZQ88 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC22.48■■□□□ 1.19
Kdm1aQ6ZQ88 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Kdm1aQ6ZQ88 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Kdm1aQ6ZQ88 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Kdm1aQ6ZQ88 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Kdm1aQ6ZQ88 Gm40881-201ENSMUST00000223397 166 ntBASIC22.47■■□□□ 1.19
Kdm1aQ6ZQ88 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Kdm1aQ6ZQ88 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Kdm1aQ6ZQ88 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Kdm1aQ6ZQ88 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Kdm1aQ6ZQ88 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Kdm1aQ6ZQ88 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Kdm1aQ6ZQ88 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Kdm1aQ6ZQ88 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Kdm1aQ6ZQ88 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Kdm1aQ6ZQ88 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Kdm1aQ6ZQ88 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Kdm1aQ6ZQ88 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Kdm1aQ6ZQ88 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Kdm1aQ6ZQ88 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC22.45■■□□□ 1.18
Kdm1aQ6ZQ88 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Kdm1aQ6ZQ88 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Kdm1aQ6ZQ88 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
Kdm1aQ6ZQ88 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC22.45■■□□□ 1.18
Kdm1aQ6ZQ88 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.45■■□□□ 1.18
Kdm1aQ6ZQ88 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Kdm1aQ6ZQ88 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC22.45■■□□□ 1.18
Kdm1aQ6ZQ88 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Kdm1aQ6ZQ88 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Kdm1aQ6ZQ88 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Kdm1aQ6ZQ88 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Kdm1aQ6ZQ88 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC22.44■■□□□ 1.18
Kdm1aQ6ZQ88 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Kdm1aQ6ZQ88 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Kdm1aQ6ZQ88 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Kdm1aQ6ZQ88 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Kdm1aQ6ZQ88 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Kdm1aQ6ZQ88 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Kdm1aQ6ZQ88 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC22.43■■□□□ 1.18
Kdm1aQ6ZQ88 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.43■■□□□ 1.18
Kdm1aQ6ZQ88 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Kdm1aQ6ZQ88 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Kdm1aQ6ZQ88 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Kdm1aQ6ZQ88 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Kdm1aQ6ZQ88 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Kdm1aQ6ZQ88 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Kdm1aQ6ZQ88 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Kdm1aQ6ZQ88 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC22.43■■□□□ 1.18
Kdm1aQ6ZQ88 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Kdm1aQ6ZQ88 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Kdm1aQ6ZQ88 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Kdm1aQ6ZQ88 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Kdm1aQ6ZQ88 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Kdm1aQ6ZQ88 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Kdm1aQ6ZQ88 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Kdm1aQ6ZQ88 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Kdm1aQ6ZQ88 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Kdm1aQ6ZQ88 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Kdm1aQ6ZQ88 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC22.41■■□□□ 1.18
Kdm1aQ6ZQ88 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Kdm1aQ6ZQ88 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.41■■□□□ 1.18
Kdm1aQ6ZQ88 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Kdm1aQ6ZQ88 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Kdm1aQ6ZQ88 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Kdm1aQ6ZQ88 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Kdm1aQ6ZQ88 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Kdm1aQ6ZQ88 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Kdm1aQ6ZQ88 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Kdm1aQ6ZQ88 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Kdm1aQ6ZQ88 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.4■■□□□ 1.18
Kdm1aQ6ZQ88 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Kdm1aQ6ZQ88 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Kdm1aQ6ZQ88 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Kdm1aQ6ZQ88 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Kdm1aQ6ZQ88 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Kdm1aQ6ZQ88 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Kdm1aQ6ZQ88 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Kdm1aQ6ZQ88 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.39■■□□□ 1.17
Kdm1aQ6ZQ88 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC22.39■■□□□ 1.17
Kdm1aQ6ZQ88 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Kdm1aQ6ZQ88 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.39■■□□□ 1.17
Kdm1aQ6ZQ88 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Kdm1aQ6ZQ88 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Kdm1aQ6ZQ88 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Kdm1aQ6ZQ88 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Kdm1aQ6ZQ88 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms