Protein–RNA interactions for Protein: Q6PFR5

Tra2a, Transformer-2 protein homolog alpha, mousemouse

Known RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tra2aQ6PFR5 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tra2aQ6PFR5 Gm11421-201ENSMUST00000122124 294 ntBASIC20.07■□□□□ 0.8
Tra2aQ6PFR5 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tra2aQ6PFR5 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.07■□□□□ 0.8
Tra2aQ6PFR5 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tra2aQ6PFR5 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tra2aQ6PFR5 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tra2aQ6PFR5 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tra2aQ6PFR5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tra2aQ6PFR5 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tra2aQ6PFR5 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tra2aQ6PFR5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tra2aQ6PFR5 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tra2aQ6PFR5 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tra2aQ6PFR5 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tra2aQ6PFR5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tra2aQ6PFR5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tra2aQ6PFR5 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tra2aQ6PFR5 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tra2aQ6PFR5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tra2aQ6PFR5 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tra2aQ6PFR5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tra2aQ6PFR5 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tra2aQ6PFR5 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.04■□□□□ 0.8
Tra2aQ6PFR5 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tra2aQ6PFR5 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tra2aQ6PFR5 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tra2aQ6PFR5 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.03■□□□□ 0.8
Tra2aQ6PFR5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Tra2aQ6PFR5 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.03■□□□□ 0.8
Tra2aQ6PFR5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Tra2aQ6PFR5 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tra2aQ6PFR5 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tra2aQ6PFR5 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tra2aQ6PFR5 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tra2aQ6PFR5 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tra2aQ6PFR5 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
Tra2aQ6PFR5 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tra2aQ6PFR5 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tra2aQ6PFR5 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tra2aQ6PFR5 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.02■□□□□ 0.8
Tra2aQ6PFR5 Gm37179-201ENSMUST00000194862 823 ntBASIC20.02■□□□□ 0.8
Tra2aQ6PFR5 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.02■□□□□ 0.8
Tra2aQ6PFR5 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tra2aQ6PFR5 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tra2aQ6PFR5 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.02■□□□□ 0.8
Tra2aQ6PFR5 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tra2aQ6PFR5 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tra2aQ6PFR5 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tra2aQ6PFR5 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Tra2aQ6PFR5 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tra2aQ6PFR5 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tra2aQ6PFR5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tra2aQ6PFR5 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tra2aQ6PFR5 Mir6236-201ENSMUST00000184437 123 ntBASIC20.01■□□□□ 0.79
Tra2aQ6PFR5 Gm10033-202ENSMUST00000211874 928 ntBASIC20.01■□□□□ 0.79
Tra2aQ6PFR5 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Tra2aQ6PFR5 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tra2aQ6PFR5 Gm44949-201ENSMUST00000206423 1450 ntBASIC20■□□□□ 0.79
Tra2aQ6PFR5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Tra2aQ6PFR5 AV356131-201ENSMUST00000206201 750 ntBASIC20■□□□□ 0.79
Tra2aQ6PFR5 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tra2aQ6PFR5 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tra2aQ6PFR5 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20■□□□□ 0.79
Tra2aQ6PFR5 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tra2aQ6PFR5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Tra2aQ6PFR5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tra2aQ6PFR5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.99■□□□□ 0.79
Tra2aQ6PFR5 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tra2aQ6PFR5 Gm42778-201ENSMUST00000199644 553 ntBASIC19.99■□□□□ 0.79
Tra2aQ6PFR5 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
Tra2aQ6PFR5 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Tra2aQ6PFR5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tra2aQ6PFR5 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Tra2aQ6PFR5 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tra2aQ6PFR5 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tra2aQ6PFR5 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tra2aQ6PFR5 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Tra2aQ6PFR5 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Tra2aQ6PFR5 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.97■□□□□ 0.79
Tra2aQ6PFR5 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.97■□□□□ 0.79
Tra2aQ6PFR5 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Tra2aQ6PFR5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tra2aQ6PFR5 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tra2aQ6PFR5 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tra2aQ6PFR5 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tra2aQ6PFR5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Tra2aQ6PFR5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Tra2aQ6PFR5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Tra2aQ6PFR5 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Tra2aQ6PFR5 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tra2aQ6PFR5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tra2aQ6PFR5 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Tra2aQ6PFR5 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Tra2aQ6PFR5 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tra2aQ6PFR5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tra2aQ6PFR5 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Tra2aQ6PFR5 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tra2aQ6PFR5 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Tra2aQ6PFR5 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms