Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpsf6Q6NVF9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Cpsf6Q6NVF9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.68■□□□□ 0.74
Cpsf6Q6NVF9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.68■□□□□ 0.74
Cpsf6Q6NVF9 Gm15820-201ENSMUST00000201566 728 ntBASIC19.68■□□□□ 0.74
Cpsf6Q6NVF9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpsf6Q6NVF9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cpsf6Q6NVF9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Cpsf6Q6NVF9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf6Q6NVF9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf6Q6NVF9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf6Q6NVF9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cpsf6Q6NVF9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf6Q6NVF9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf6Q6NVF9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf6Q6NVF9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf6Q6NVF9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf6Q6NVF9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf6Q6NVF9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Cpsf6Q6NVF9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf6Q6NVF9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf6Q6NVF9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf6Q6NVF9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf6Q6NVF9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf6Q6NVF9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf6Q6NVF9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.66■□□□□ 0.74
Cpsf6Q6NVF9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf6Q6NVF9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf6Q6NVF9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf6Q6NVF9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf6Q6NVF9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cpsf6Q6NVF9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf6Q6NVF9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf6Q6NVF9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.65■□□□□ 0.74
Cpsf6Q6NVF9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.65■□□□□ 0.74
Cpsf6Q6NVF9 Gm40881-201ENSMUST00000223397 166 ntBASIC19.65■□□□□ 0.74
Cpsf6Q6NVF9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf6Q6NVF9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf6Q6NVF9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf6Q6NVF9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.65■□□□□ 0.74
Cpsf6Q6NVF9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf6Q6NVF9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Cpsf6Q6NVF9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Cpsf6Q6NVF9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Cpsf6Q6NVF9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cpsf6Q6NVF9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cpsf6Q6NVF9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cpsf6Q6NVF9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cpsf6Q6NVF9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf6Q6NVF9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf6Q6NVF9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf6Q6NVF9 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.63■□□□□ 0.73
Cpsf6Q6NVF9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.63■□□□□ 0.73
Cpsf6Q6NVF9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Cpsf6Q6NVF9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf6Q6NVF9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf6Q6NVF9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf6Q6NVF9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf6Q6NVF9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.62■□□□□ 0.73
Cpsf6Q6NVF9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cpsf6Q6NVF9 Gm5812-201ENSMUST00000061073 957 ntBASIC19.62■□□□□ 0.73
Cpsf6Q6NVF9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf6Q6NVF9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cpsf6Q6NVF9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf6Q6NVF9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf6Q6NVF9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.61■□□□□ 0.73
Cpsf6Q6NVF9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf6Q6NVF9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf6Q6NVF9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf6Q6NVF9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf6Q6NVF9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf6Q6NVF9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.61■□□□□ 0.73
Cpsf6Q6NVF9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf6Q6NVF9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf6Q6NVF9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf6Q6NVF9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf6Q6NVF9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf6Q6NVF9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf6Q6NVF9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf6Q6NVF9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf6Q6NVF9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf6Q6NVF9 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.6■□□□□ 0.73
Cpsf6Q6NVF9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf6Q6NVF9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf6Q6NVF9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cpsf6Q6NVF9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf6Q6NVF9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf6Q6NVF9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf6Q6NVF9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf6Q6NVF9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf6Q6NVF9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Cpsf6Q6NVF9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf6Q6NVF9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf6Q6NVF9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cpsf6Q6NVF9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cpsf6Q6NVF9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cpsf6Q6NVF9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cpsf6Q6NVF9 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.58■□□□□ 0.72
Cpsf6Q6NVF9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cpsf6Q6NVF9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms