Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.69■□□□□ 0.74
Pcdhga7Q6DD96 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
Pcdhga7Q6DD96 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga7Q6DD96 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Pcdhga7Q6DD96 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga7Q6DD96 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga7Q6DD96 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhga7Q6DD96 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhga7Q6DD96 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga7Q6DD96 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga7Q6DD96 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga7Q6DD96 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga7Q6DD96 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga7Q6DD96 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdhga7Q6DD96 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhga7Q6DD96 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhga7Q6DD96 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdhga7Q6DD96 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhga7Q6DD96 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhga7Q6DD96 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhga7Q6DD96 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Pcdhga7Q6DD96 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhga7Q6DD96 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhga7Q6DD96 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhga7Q6DD96 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhga7Q6DD96 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhga7Q6DD96 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhga7Q6DD96 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhga7Q6DD96 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhga7Q6DD96 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhga7Q6DD96 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdhga7Q6DD96 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.66■□□□□ 0.74
Pcdhga7Q6DD96 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhga7Q6DD96 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhga7Q6DD96 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhga7Q6DD96 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.66■□□□□ 0.74
Pcdhga7Q6DD96 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhga7Q6DD96 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhga7Q6DD96 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhga7Q6DD96 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhga7Q6DD96 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhga7Q6DD96 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.65■□□□□ 0.74
Pcdhga7Q6DD96 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.65■□□□□ 0.74
Pcdhga7Q6DD96 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhga7Q6DD96 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhga7Q6DD96 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Pcdhga7Q6DD96 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhga7Q6DD96 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhga7Q6DD96 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Pcdhga7Q6DD96 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhga7Q6DD96 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Pcdhga7Q6DD96 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhga7Q6DD96 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhga7Q6DD96 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhga7Q6DD96 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Pcdhga7Q6DD96 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdhga7Q6DD96 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhga7Q6DD96 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhga7Q6DD96 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Pcdhga7Q6DD96 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.62■□□□□ 0.73
Pcdhga7Q6DD96 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhga7Q6DD96 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhga7Q6DD96 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Pcdhga7Q6DD96 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhga7Q6DD96 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhga7Q6DD96 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhga7Q6DD96 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhga7Q6DD96 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhga7Q6DD96 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhga7Q6DD96 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhga7Q6DD96 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhga7Q6DD96 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhga7Q6DD96 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
Pcdhga7Q6DD96 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhga7Q6DD96 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhga7Q6DD96 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhga7Q6DD96 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhga7Q6DD96 Gm10399-202ENSMUST00000202768 748 ntBASIC19.6■□□□□ 0.73
Pcdhga7Q6DD96 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhga7Q6DD96 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhga7Q6DD96 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhga7Q6DD96 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhga7Q6DD96 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhga7Q6DD96 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhga7Q6DD96 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhga7Q6DD96 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhga7Q6DD96 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhga7Q6DD96 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhga7Q6DD96 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Pcdhga7Q6DD96 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhga7Q6DD96 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhga7Q6DD96 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhga7Q6DD96 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhga7Q6DD96 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhga7Q6DD96 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhga7Q6DD96 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhga7Q6DD96 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhga7Q6DD96 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhga7Q6DD96 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhga7Q6DD96 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms