Protein–RNA interactions for Protein: Q68FH0

Pkp4, Plakophilin-4, mousemouse

Predictions only

Length 1,190 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4Q68FH0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pkp4Q68FH0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pkp4Q68FH0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.44■□□□□ 0.7
Pkp4Q68FH0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.44■□□□□ 0.7
Pkp4Q68FH0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pkp4Q68FH0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pkp4Q68FH0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pkp4Q68FH0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pkp4Q68FH0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pkp4Q68FH0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pkp4Q68FH0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pkp4Q68FH0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Pkp4Q68FH0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pkp4Q68FH0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pkp4Q68FH0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pkp4Q68FH0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Pkp4Q68FH0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pkp4Q68FH0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pkp4Q68FH0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.42■□□□□ 0.7
Pkp4Q68FH0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Pkp4Q68FH0 Gm15820-201ENSMUST00000201566 728 ntBASIC19.42■□□□□ 0.7
Pkp4Q68FH0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.42■□□□□ 0.7
Pkp4Q68FH0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pkp4Q68FH0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pkp4Q68FH0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pkp4Q68FH0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Pkp4Q68FH0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pkp4Q68FH0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pkp4Q68FH0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pkp4Q68FH0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pkp4Q68FH0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pkp4Q68FH0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pkp4Q68FH0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pkp4Q68FH0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.4■□□□□ 0.7
Pkp4Q68FH0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Pkp4Q68FH0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pkp4Q68FH0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Pkp4Q68FH0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Pkp4Q68FH0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pkp4Q68FH0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pkp4Q68FH0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pkp4Q68FH0 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.39■□□□□ 0.69
Pkp4Q68FH0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pkp4Q68FH0 Gm5812-201ENSMUST00000061073 957 ntBASIC19.39■□□□□ 0.69
Pkp4Q68FH0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pkp4Q68FH0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pkp4Q68FH0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pkp4Q68FH0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Pkp4Q68FH0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pkp4Q68FH0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pkp4Q68FH0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pkp4Q68FH0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Pkp4Q68FH0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pkp4Q68FH0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pkp4Q68FH0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pkp4Q68FH0 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.38■□□□□ 0.69
Pkp4Q68FH0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pkp4Q68FH0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pkp4Q68FH0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pkp4Q68FH0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pkp4Q68FH0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pkp4Q68FH0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pkp4Q68FH0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pkp4Q68FH0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pkp4Q68FH0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pkp4Q68FH0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.37■□□□□ 0.69
Pkp4Q68FH0 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.37■□□□□ 0.69
Pkp4Q68FH0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pkp4Q68FH0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pkp4Q68FH0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.37■□□□□ 0.69
Pkp4Q68FH0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pkp4Q68FH0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pkp4Q68FH0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pkp4Q68FH0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pkp4Q68FH0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pkp4Q68FH0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pkp4Q68FH0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pkp4Q68FH0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.35■□□□□ 0.69
Pkp4Q68FH0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Pkp4Q68FH0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pkp4Q68FH0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.35■□□□□ 0.69
Pkp4Q68FH0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.35■□□□□ 0.69
Pkp4Q68FH0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.35■□□□□ 0.69
Pkp4Q68FH0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pkp4Q68FH0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pkp4Q68FH0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pkp4Q68FH0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pkp4Q68FH0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pkp4Q68FH0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pkp4Q68FH0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pkp4Q68FH0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.34■□□□□ 0.69
Pkp4Q68FH0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pkp4Q68FH0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Pkp4Q68FH0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pkp4Q68FH0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pkp4Q68FH0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pkp4Q68FH0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.34■□□□□ 0.69
Pkp4Q68FH0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Pkp4Q68FH0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pkp4Q68FH0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms