Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Commd3Q63829 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Commd3Q63829 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Commd3Q63829 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.89■□□□□ 0.3
Commd3Q63829 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Commd3Q63829 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Commd3Q63829 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Commd3Q63829 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Commd3Q63829 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Commd3Q63829 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.89■□□□□ 0.29
Commd3Q63829 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Commd3Q63829 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Commd3Q63829 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Commd3Q63829 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Commd3Q63829 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.89■□□□□ 0.29
Commd3Q63829 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Commd3Q63829 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Commd3Q63829 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Commd3Q63829 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Commd3Q63829 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Commd3Q63829 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Commd3Q63829 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Commd3Q63829 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Commd3Q63829 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.88■□□□□ 0.29
Commd3Q63829 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Commd3Q63829 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.88■□□□□ 0.29
Commd3Q63829 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Commd3Q63829 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Commd3Q63829 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Commd3Q63829 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.88■□□□□ 0.29
Commd3Q63829 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Commd3Q63829 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Commd3Q63829 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Commd3Q63829 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Commd3Q63829 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Commd3Q63829 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Commd3Q63829 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Commd3Q63829 Gm8503-201ENSMUST00000118131 455 ntBASIC16.87■□□□□ 0.29
Commd3Q63829 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.87■□□□□ 0.29
Commd3Q63829 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Commd3Q63829 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Commd3Q63829 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Commd3Q63829 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Commd3Q63829 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Commd3Q63829 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Commd3Q63829 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
Commd3Q63829 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Commd3Q63829 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Commd3Q63829 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Commd3Q63829 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Commd3Q63829 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Commd3Q63829 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Commd3Q63829 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Commd3Q63829 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Commd3Q63829 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Commd3Q63829 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Commd3Q63829 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Commd3Q63829 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Commd3Q63829 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Commd3Q63829 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Commd3Q63829 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Commd3Q63829 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Commd3Q63829 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Commd3Q63829 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Commd3Q63829 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Commd3Q63829 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Commd3Q63829 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Commd3Q63829 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.84■□□□□ 0.29
Commd3Q63829 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Commd3Q63829 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Commd3Q63829 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Commd3Q63829 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Commd3Q63829 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Commd3Q63829 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Commd3Q63829 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Commd3Q63829 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Commd3Q63829 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Commd3Q63829 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Commd3Q63829 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Commd3Q63829 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Commd3Q63829 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Commd3Q63829 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Commd3Q63829 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Commd3Q63829 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.83■□□□□ 0.28
Commd3Q63829 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.83■□□□□ 0.28
Commd3Q63829 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Commd3Q63829 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Commd3Q63829 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Commd3Q63829 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Commd3Q63829 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Commd3Q63829 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Commd3Q63829 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Commd3Q63829 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Commd3Q63829 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.83■□□□□ 0.28
Commd3Q63829 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.82■□□□□ 0.28
Commd3Q63829 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Commd3Q63829 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Commd3Q63829 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Commd3Q63829 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Commd3Q63829 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms