Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Six1Q62231 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Six1Q62231 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Six1Q62231 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Six1Q62231 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Six1Q62231 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Six1Q62231 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.99■□□□□ 0.95
Six1Q62231 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Six1Q62231 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.99■□□□□ 0.95
Six1Q62231 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Six1Q62231 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Six1Q62231 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Six1Q62231 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Six1Q62231 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Six1Q62231 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Six1Q62231 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.98■□□□□ 0.95
Six1Q62231 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Six1Q62231 Gm5921-201ENSMUST00000075898 882 ntBASIC20.98■□□□□ 0.95
Six1Q62231 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Six1Q62231 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Six1Q62231 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Six1Q62231 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Six1Q62231 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Six1Q62231 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Six1Q62231 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Six1Q62231 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Six1Q62231 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Six1Q62231 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Six1Q62231 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Six1Q62231 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Six1Q62231 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Six1Q62231 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Six1Q62231 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Six1Q62231 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Six1Q62231 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Six1Q62231 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.96■□□□□ 0.95
Six1Q62231 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Six1Q62231 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Six1Q62231 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Six1Q62231 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Six1Q62231 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Six1Q62231 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Six1Q62231 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Six1Q62231 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Six1Q62231 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Six1Q62231 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Six1Q62231 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Six1Q62231 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Six1Q62231 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Six1Q62231 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Six1Q62231 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six1Q62231 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six1Q62231 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six1Q62231 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six1Q62231 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.94■□□□□ 0.94
Six1Q62231 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Six1Q62231 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six1Q62231 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Six1Q62231 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Six1Q62231 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Six1Q62231 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six1Q62231 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Six1Q62231 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six1Q62231 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six1Q62231 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Six1Q62231 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Six1Q62231 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Six1Q62231 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Six1Q62231 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Six1Q62231 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Six1Q62231 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Six1Q62231 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Six1Q62231 Iqck-206ENSMUST00000208658 2891 ntBASIC20.92■□□□□ 0.94
Six1Q62231 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Six1Q62231 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Six1Q62231 Gm10399-202ENSMUST00000202768 748 ntBASIC20.92■□□□□ 0.94
Six1Q62231 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.92■□□□□ 0.94
Six1Q62231 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Six1Q62231 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Six1Q62231 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Six1Q62231 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Six1Q62231 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Six1Q62231 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Six1Q62231 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Six1Q62231 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Six1Q62231 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Six1Q62231 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Six1Q62231 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Six1Q62231 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.9■□□□□ 0.94
Six1Q62231 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Six1Q62231 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Six1Q62231 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Six1Q62231 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Six1Q62231 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Six1Q62231 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Six1Q62231 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Six1Q62231 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.89■□□□□ 0.94
Six1Q62231 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
Six1Q62231 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Six1Q62231 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms