Protein–RNA interactions for Protein: Q62193

Rpa2, Replication protein A 32 kDa subunit, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa2Q62193 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.62■□□□□ 0.57
Rpa2Q62193 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa2Q62193 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa2Q62193 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa2Q62193 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa2Q62193 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa2Q62193 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa2Q62193 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa2Q62193 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa2Q62193 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa2Q62193 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa2Q62193 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa2Q62193 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa2Q62193 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.61■□□□□ 0.57
Rpa2Q62193 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa2Q62193 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa2Q62193 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa2Q62193 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rpa2Q62193 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpa2Q62193 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpa2Q62193 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpa2Q62193 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpa2Q62193 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpa2Q62193 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rpa2Q62193 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpa2Q62193 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rpa2Q62193 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rpa2Q62193 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpa2Q62193 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpa2Q62193 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpa2Q62193 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpa2Q62193 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Rpa2Q62193 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpa2Q62193 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpa2Q62193 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rpa2Q62193 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpa2Q62193 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpa2Q62193 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpa2Q62193 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.58■□□□□ 0.57
Rpa2Q62193 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rpa2Q62193 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Rpa2Q62193 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.58■□□□□ 0.56
Rpa2Q62193 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpa2Q62193 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpa2Q62193 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpa2Q62193 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rpa2Q62193 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpa2Q62193 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
Rpa2Q62193 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpa2Q62193 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpa2Q62193 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.57■□□□□ 0.56
Rpa2Q62193 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.57■□□□□ 0.56
Rpa2Q62193 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.57■□□□□ 0.56
Rpa2Q62193 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpa2Q62193 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rpa2Q62193 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpa2Q62193 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpa2Q62193 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.56■□□□□ 0.56
Rpa2Q62193 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpa2Q62193 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpa2Q62193 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.56■□□□□ 0.56
Rpa2Q62193 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Rpa2Q62193 Gm9870-201ENSMUST00000063874 645 ntBASIC18.56■□□□□ 0.56
Rpa2Q62193 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpa2Q62193 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpa2Q62193 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpa2Q62193 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
Rpa2Q62193 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpa2Q62193 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpa2Q62193 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpa2Q62193 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rpa2Q62193 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.55■□□□□ 0.56
Rpa2Q62193 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.55■□□□□ 0.56
Rpa2Q62193 Gm7143-201ENSMUST00000222811 859 ntBASIC18.55■□□□□ 0.56
Rpa2Q62193 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpa2Q62193 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpa2Q62193 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpa2Q62193 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpa2Q62193 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.54■□□□□ 0.56
Rpa2Q62193 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rpa2Q62193 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rpa2Q62193 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpa2Q62193 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rpa2Q62193 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Rpa2Q62193 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpa2Q62193 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpa2Q62193 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpa2Q62193 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rpa2Q62193 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpa2Q62193 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpa2Q62193 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpa2Q62193 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.53■□□□□ 0.56
Rpa2Q62193 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rpa2Q62193 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpa2Q62193 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpa2Q62193 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.52■□□□□ 0.56
Rpa2Q62193 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.52■□□□□ 0.56
Rpa2Q62193 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpa2Q62193 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpa2Q62193 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 565.3 ms