Protein–RNA interactions for Protein: Q62177

Sema3b, Semaphorin-3B, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3bQ62177 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sema3bQ62177 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sema3bQ62177 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sema3bQ62177 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sema3bQ62177 Gm43173-201ENSMUST00000202246 593 ntBASIC19.29■□□□□ 0.68
Sema3bQ62177 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.29■□□□□ 0.68
Sema3bQ62177 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.29■□□□□ 0.68
Sema3bQ62177 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Sema3bQ62177 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sema3bQ62177 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sema3bQ62177 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sema3bQ62177 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sema3bQ62177 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sema3bQ62177 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sema3bQ62177 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sema3bQ62177 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Sema3bQ62177 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.28■□□□□ 0.68
Sema3bQ62177 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sema3bQ62177 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sema3bQ62177 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Sema3bQ62177 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.28■□□□□ 0.68
Sema3bQ62177 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sema3bQ62177 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.28■□□□□ 0.68
Sema3bQ62177 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sema3bQ62177 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Sema3bQ62177 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sema3bQ62177 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Sema3bQ62177 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sema3bQ62177 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sema3bQ62177 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sema3bQ62177 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sema3bQ62177 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sema3bQ62177 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
Sema3bQ62177 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Sema3bQ62177 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sema3bQ62177 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sema3bQ62177 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sema3bQ62177 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Sema3bQ62177 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Sema3bQ62177 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sema3bQ62177 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.27■□□□□ 0.67
Sema3bQ62177 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sema3bQ62177 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sema3bQ62177 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sema3bQ62177 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sema3bQ62177 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sema3bQ62177 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.26■□□□□ 0.67
Sema3bQ62177 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.25■□□□□ 0.67
Sema3bQ62177 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sema3bQ62177 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.25■□□□□ 0.67
Sema3bQ62177 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sema3bQ62177 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sema3bQ62177 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.25■□□□□ 0.67
Sema3bQ62177 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sema3bQ62177 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sema3bQ62177 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sema3bQ62177 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sema3bQ62177 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Sema3bQ62177 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.24■□□□□ 0.67
Sema3bQ62177 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.24■□□□□ 0.67
Sema3bQ62177 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.24■□□□□ 0.67
Sema3bQ62177 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sema3bQ62177 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Sema3bQ62177 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sema3bQ62177 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sema3bQ62177 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sema3bQ62177 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Sema3bQ62177 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Sema3bQ62177 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Sema3bQ62177 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sema3bQ62177 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Sema3bQ62177 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sema3bQ62177 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sema3bQ62177 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.23■□□□□ 0.67
Sema3bQ62177 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sema3bQ62177 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sema3bQ62177 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sema3bQ62177 Gm27405-201ENSMUST00000184201 112 ntBASIC19.23■□□□□ 0.67
Sema3bQ62177 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Sema3bQ62177 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sema3bQ62177 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sema3bQ62177 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sema3bQ62177 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sema3bQ62177 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Sema3bQ62177 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sema3bQ62177 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Sema3bQ62177 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.22■□□□□ 0.67
Sema3bQ62177 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sema3bQ62177 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sema3bQ62177 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sema3bQ62177 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sema3bQ62177 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sema3bQ62177 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sema3bQ62177 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sema3bQ62177 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.22■□□□□ 0.67
Sema3bQ62177 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sema3bQ62177 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sema3bQ62177 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Sema3bQ62177 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sema3bQ62177 Gm10493-201ENSMUST00000097270 612 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms