Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sox17Q61473 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Sox17Q61473 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Sox17Q61473 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Sox17Q61473 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Sox17Q61473 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Sox17Q61473 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox17Q61473 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox17Q61473 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sox17Q61473 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox17Q61473 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox17Q61473 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Sox17Q61473 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox17Q61473 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox17Q61473 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox17Q61473 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox17Q61473 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox17Q61473 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sox17Q61473 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox17Q61473 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Sox17Q61473 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Sox17Q61473 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.05■□□□□ 0.64
Sox17Q61473 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Sox17Q61473 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Sox17Q61473 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox17Q61473 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sox17Q61473 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox17Q61473 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox17Q61473 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sox17Q61473 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Sox17Q61473 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sox17Q61473 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox17Q61473 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox17Q61473 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.04■□□□□ 0.64
Sox17Q61473 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.04■□□□□ 0.64
Sox17Q61473 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Sox17Q61473 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox17Q61473 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox17Q61473 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox17Q61473 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Sox17Q61473 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox17Q61473 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox17Q61473 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.03■□□□□ 0.64
Sox17Q61473 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox17Q61473 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox17Q61473 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox17Q61473 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Sox17Q61473 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.03■□□□□ 0.64
Sox17Q61473 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.03■□□□□ 0.64
Sox17Q61473 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.03■□□□□ 0.64
Sox17Q61473 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.03■□□□□ 0.64
Sox17Q61473 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sox17Q61473 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Sox17Q61473 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox17Q61473 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Sox17Q61473 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox17Q61473 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Sox17Q61473 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox17Q61473 Gm27502-201ENSMUST00000183495 199 ntBASIC19.02■□□□□ 0.64
Sox17Q61473 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.02■□□□□ 0.64
Sox17Q61473 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox17Q61473 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox17Q61473 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Sox17Q61473 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sox17Q61473 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox17Q61473 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox17Q61473 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Sox17Q61473 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox17Q61473 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.01■□□□□ 0.63
Sox17Q61473 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox17Q61473 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox17Q61473 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox17Q61473 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox17Q61473 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox17Q61473 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19■□□□□ 0.63
Sox17Q61473 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19■□□□□ 0.63
Sox17Q61473 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox17Q61473 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19■□□□□ 0.63
Sox17Q61473 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19■□□□□ 0.63
Sox17Q61473 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox17Q61473 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox17Q61473 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox17Q61473 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19■□□□□ 0.63
Sox17Q61473 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox17Q61473 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19■□□□□ 0.63
Sox17Q61473 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sox17Q61473 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox17Q61473 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox17Q61473 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sox17Q61473 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox17Q61473 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox17Q61473 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox17Q61473 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sox17Q61473 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Sox17Q61473 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox17Q61473 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox17Q61473 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.98■□□□□ 0.63
Sox17Q61473 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox17Q61473 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox17Q61473 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms