Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vsx2Q61412 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vsx2Q61412 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vsx2Q61412 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vsx2Q61412 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vsx2Q61412 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vsx2Q61412 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vsx2Q61412 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vsx2Q61412 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vsx2Q61412 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vsx2Q61412 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.71■□□□□ 0.75
Vsx2Q61412 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vsx2Q61412 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vsx2Q61412 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vsx2Q61412 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vsx2Q61412 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vsx2Q61412 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Vsx2Q61412 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vsx2Q61412 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vsx2Q61412 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vsx2Q61412 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vsx2Q61412 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vsx2Q61412 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vsx2Q61412 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vsx2Q61412 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vsx2Q61412 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vsx2Q61412 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vsx2Q61412 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vsx2Q61412 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.69■□□□□ 0.74
Vsx2Q61412 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vsx2Q61412 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vsx2Q61412 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.68■□□□□ 0.74
Vsx2Q61412 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.68■□□□□ 0.74
Vsx2Q61412 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Vsx2Q61412 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vsx2Q61412 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.67■□□□□ 0.74
Vsx2Q61412 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vsx2Q61412 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vsx2Q61412 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vsx2Q61412 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Vsx2Q61412 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vsx2Q61412 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Vsx2Q61412 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vsx2Q61412 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Vsx2Q61412 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vsx2Q61412 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vsx2Q61412 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Vsx2Q61412 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Vsx2Q61412 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vsx2Q61412 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Vsx2Q61412 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vsx2Q61412 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vsx2Q61412 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vsx2Q61412 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vsx2Q61412 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vsx2Q61412 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vsx2Q61412 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vsx2Q61412 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vsx2Q61412 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.65■□□□□ 0.74
Vsx2Q61412 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vsx2Q61412 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
Vsx2Q61412 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.64■□□□□ 0.73
Vsx2Q61412 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.64■□□□□ 0.73
Vsx2Q61412 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vsx2Q61412 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vsx2Q61412 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vsx2Q61412 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vsx2Q61412 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vsx2Q61412 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.63■□□□□ 0.73
Vsx2Q61412 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vsx2Q61412 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vsx2Q61412 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.63■□□□□ 0.73
Vsx2Q61412 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vsx2Q61412 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vsx2Q61412 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vsx2Q61412 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Vsx2Q61412 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vsx2Q61412 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vsx2Q61412 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Vsx2Q61412 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vsx2Q61412 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.62■□□□□ 0.73
Vsx2Q61412 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vsx2Q61412 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vsx2Q61412 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Vsx2Q61412 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vsx2Q61412 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vsx2Q61412 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vsx2Q61412 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vsx2Q61412 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vsx2Q61412 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vsx2Q61412 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Vsx2Q61412 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vsx2Q61412 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vsx2Q61412 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Vsx2Q61412 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vsx2Q61412 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vsx2Q61412 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vsx2Q61412 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vsx2Q61412 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vsx2Q61412 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms