Protein–RNA interactions for Protein: Q61056

Trpc1, Short transient receptor potential channel 1, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpc1Q61056 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.68■□□□□ 0.74
Trpc1Q61056 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpc1Q61056 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpc1Q61056 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpc1Q61056 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpc1Q61056 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpc1Q61056 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpc1Q61056 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpc1Q61056 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trpc1Q61056 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trpc1Q61056 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.67■□□□□ 0.74
Trpc1Q61056 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Trpc1Q61056 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Trpc1Q61056 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trpc1Q61056 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trpc1Q61056 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trpc1Q61056 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trpc1Q61056 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trpc1Q61056 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trpc1Q61056 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trpc1Q61056 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trpc1Q61056 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trpc1Q61056 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trpc1Q61056 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Trpc1Q61056 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trpc1Q61056 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trpc1Q61056 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trpc1Q61056 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trpc1Q61056 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trpc1Q61056 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Trpc1Q61056 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trpc1Q61056 Gm45444-201ENSMUST00000211394 898 ntBASIC19.65■□□□□ 0.74
Trpc1Q61056 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trpc1Q61056 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trpc1Q61056 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trpc1Q61056 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trpc1Q61056 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.65■□□□□ 0.74
Trpc1Q61056 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trpc1Q61056 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Trpc1Q61056 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.64■□□□□ 0.73
Trpc1Q61056 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Trpc1Q61056 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trpc1Q61056 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.64■□□□□ 0.73
Trpc1Q61056 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trpc1Q61056 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trpc1Q61056 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Trpc1Q61056 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trpc1Q61056 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trpc1Q61056 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trpc1Q61056 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trpc1Q61056 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trpc1Q61056 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trpc1Q61056 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trpc1Q61056 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Trpc1Q61056 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.63■□□□□ 0.73
Trpc1Q61056 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trpc1Q61056 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trpc1Q61056 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trpc1Q61056 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.63■□□□□ 0.73
Trpc1Q61056 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trpc1Q61056 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trpc1Q61056 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Trpc1Q61056 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trpc1Q61056 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Trpc1Q61056 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.63■□□□□ 0.73
Trpc1Q61056 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trpc1Q61056 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trpc1Q61056 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trpc1Q61056 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.62■□□□□ 0.73
Trpc1Q61056 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Trpc1Q61056 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trpc1Q61056 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trpc1Q61056 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trpc1Q61056 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trpc1Q61056 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trpc1Q61056 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trpc1Q61056 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.62■□□□□ 0.73
Trpc1Q61056 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.62■□□□□ 0.73
Trpc1Q61056 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trpc1Q61056 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trpc1Q61056 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.62■□□□□ 0.73
Trpc1Q61056 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trpc1Q61056 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trpc1Q61056 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Trpc1Q61056 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.61■□□□□ 0.73
Trpc1Q61056 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trpc1Q61056 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trpc1Q61056 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.61■□□□□ 0.73
Trpc1Q61056 Gm15546-201ENSMUST00000122095 826 ntBASIC19.61■□□□□ 0.73
Trpc1Q61056 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trpc1Q61056 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.61■□□□□ 0.73
Trpc1Q61056 Gm43566-201ENSMUST00000196851 808 ntBASIC19.61■□□□□ 0.73
Trpc1Q61056 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.61■□□□□ 0.73
Trpc1Q61056 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.61■□□□□ 0.73
Trpc1Q61056 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trpc1Q61056 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trpc1Q61056 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.61■□□□□ 0.73
Trpc1Q61056 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trpc1Q61056 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trpc1Q61056 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms