Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sim1Q61045 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Sim1Q61045 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sim1Q61045 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sim1Q61045 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Sim1Q61045 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Sim1Q61045 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sim1Q61045 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sim1Q61045 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Sim1Q61045 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.17■□□□□ 0.82
Sim1Q61045 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sim1Q61045 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sim1Q61045 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sim1Q61045 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sim1Q61045 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sim1Q61045 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.16■□□□□ 0.82
Sim1Q61045 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sim1Q61045 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sim1Q61045 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sim1Q61045 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sim1Q61045 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Sim1Q61045 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sim1Q61045 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Sim1Q61045 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sim1Q61045 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sim1Q61045 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sim1Q61045 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sim1Q61045 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Sim1Q61045 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sim1Q61045 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.14■□□□□ 0.81
Sim1Q61045 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sim1Q61045 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Sim1Q61045 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Sim1Q61045 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sim1Q61045 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Sim1Q61045 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sim1Q61045 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sim1Q61045 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sim1Q61045 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sim1Q61045 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sim1Q61045 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Sim1Q61045 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.13■□□□□ 0.81
Sim1Q61045 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.13■□□□□ 0.81
Sim1Q61045 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.13■□□□□ 0.81
Sim1Q61045 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sim1Q61045 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sim1Q61045 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sim1Q61045 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
Sim1Q61045 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sim1Q61045 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sim1Q61045 Gm8493-201ENSMUST00000196881 489 ntBASIC20.12■□□□□ 0.81
Sim1Q61045 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Sim1Q61045 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sim1Q61045 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sim1Q61045 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Sim1Q61045 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sim1Q61045 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sim1Q61045 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sim1Q61045 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sim1Q61045 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sim1Q61045 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sim1Q61045 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sim1Q61045 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sim1Q61045 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sim1Q61045 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sim1Q61045 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sim1Q61045 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sim1Q61045 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sim1Q61045 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sim1Q61045 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sim1Q61045 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sim1Q61045 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sim1Q61045 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sim1Q61045 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sim1Q61045 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.09■□□□□ 0.81
Sim1Q61045 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.09■□□□□ 0.81
Sim1Q61045 Gm9870-201ENSMUST00000063874 645 ntBASIC20.09■□□□□ 0.81
Sim1Q61045 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sim1Q61045 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sim1Q61045 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Sim1Q61045 Gm7291-201ENSMUST00000199147 382 ntBASIC20.08■□□□□ 0.81
Sim1Q61045 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.08■□□□□ 0.81
Sim1Q61045 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sim1Q61045 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sim1Q61045 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Sim1Q61045 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sim1Q61045 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sim1Q61045 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.07■□□□□ 0.8
Sim1Q61045 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sim1Q61045 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sim1Q61045 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sim1Q61045 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.07■□□□□ 0.8
Sim1Q61045 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sim1Q61045 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sim1Q61045 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sim1Q61045 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sim1Q61045 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sim1Q61045 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sim1Q61045 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sim1Q61045 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms