Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.3■□□□□ 0.68
Nr1h4Q60641 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.3■□□□□ 0.68
Nr1h4Q60641 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1h4Q60641 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.3■□□□□ 0.68
Nr1h4Q60641 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Nr1h4Q60641 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1h4Q60641 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1h4Q60641 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1h4Q60641 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Nr1h4Q60641 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nr1h4Q60641 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1h4Q60641 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1h4Q60641 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Nr1h4Q60641 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.29■□□□□ 0.68
Nr1h4Q60641 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1h4Q60641 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1h4Q60641 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1h4Q60641 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.29■□□□□ 0.68
Nr1h4Q60641 Gm12366-201ENSMUST00000121722 873 ntBASIC19.29■□□□□ 0.68
Nr1h4Q60641 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.29■□□□□ 0.68
Nr1h4Q60641 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.29■□□□□ 0.68
Nr1h4Q60641 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Nr1h4Q60641 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.29■□□□□ 0.68
Nr1h4Q60641 Gm5786-201ENSMUST00000085368 882 ntBASIC19.29■□□□□ 0.68
Nr1h4Q60641 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1h4Q60641 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1h4Q60641 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr1h4Q60641 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.28■□□□□ 0.68
Nr1h4Q60641 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr1h4Q60641 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Nr1h4Q60641 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nr1h4Q60641 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Nr1h4Q60641 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.28■□□□□ 0.68
Nr1h4Q60641 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nr1h4Q60641 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr1h4Q60641 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr1h4Q60641 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr1h4Q60641 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr1h4Q60641 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr1h4Q60641 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr1h4Q60641 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nr1h4Q60641 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nr1h4Q60641 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nr1h4Q60641 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nr1h4Q60641 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nr1h4Q60641 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Nr1h4Q60641 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nr1h4Q60641 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nr1h4Q60641 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nr1h4Q60641 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nr1h4Q60641 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.27■□□□□ 0.68
Nr1h4Q60641 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.27■□□□□ 0.68
Nr1h4Q60641 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nr1h4Q60641 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nr1h4Q60641 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nr1h4Q60641 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nr1h4Q60641 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Nr1h4Q60641 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nr1h4Q60641 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr1h4Q60641 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr1h4Q60641 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr1h4Q60641 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.26■□□□□ 0.67
Nr1h4Q60641 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Nr1h4Q60641 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr1h4Q60641 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr1h4Q60641 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Nr1h4Q60641 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr1h4Q60641 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr1h4Q60641 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.26■□□□□ 0.67
Nr1h4Q60641 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nr1h4Q60641 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Nr1h4Q60641 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1h4Q60641 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Nr1h4Q60641 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.25■□□□□ 0.67
Nr1h4Q60641 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1h4Q60641 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1h4Q60641 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Nr1h4Q60641 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.25■□□□□ 0.67
Nr1h4Q60641 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1h4Q60641 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1h4Q60641 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1h4Q60641 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Nr1h4Q60641 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nr1h4Q60641 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nr1h4Q60641 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nr1h4Q60641 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.24■□□□□ 0.67
Nr1h4Q60641 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nr1h4Q60641 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nr1h4Q60641 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nr1h4Q60641 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nr1h4Q60641 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.24■□□□□ 0.67
Nr1h4Q60641 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nr1h4Q60641 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Nr1h4Q60641 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nr1h4Q60641 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nr1h4Q60641 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nr1h4Q60641 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nr1h4Q60641 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Nr1h4Q60641 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nr1h4Q60641 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms