Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Gm11687-201ENSMUST00000118911 886 ntBASIC15.79■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.77■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.77■□□□□ 0.12
Trav15-1-dv6-1Q5R1D2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.75■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.72■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15-1-dv6-1Q5R1D2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms