Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Herc2Q4U2R1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Herc2Q4U2R1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.53□□□□□ -0.4
Herc2Q4U2R1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC12.53□□□□□ -0.4
Herc2Q4U2R1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Herc2Q4U2R1 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.52□□□□□ -0.4
Herc2Q4U2R1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC12.52□□□□□ -0.4
Herc2Q4U2R1 Gm25925-201ENSMUST00000158314 306 ntBASIC12.52□□□□□ -0.41
Herc2Q4U2R1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Herc2Q4U2R1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Herc2Q4U2R1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC12.52□□□□□ -0.41
Herc2Q4U2R1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Herc2Q4U2R1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Herc2Q4U2R1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Herc2Q4U2R1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Herc2Q4U2R1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC12.51□□□□□ -0.41
Herc2Q4U2R1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Herc2Q4U2R1 Gm14281-201ENSMUST00000121700 1294 ntBASIC12.51□□□□□ -0.41
Herc2Q4U2R1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Herc2Q4U2R1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Herc2Q4U2R1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Herc2Q4U2R1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.51□□□□□ -0.41
Herc2Q4U2R1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Herc2Q4U2R1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Herc2Q4U2R1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Herc2Q4U2R1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Herc2Q4U2R1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.5□□□□□ -0.41
Herc2Q4U2R1 Gm21362-201ENSMUST00000194272 928 ntBASIC12.5□□□□□ -0.41
Herc2Q4U2R1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Herc2Q4U2R1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC12.5□□□□□ -0.41
Herc2Q4U2R1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC12.5□□□□□ -0.41
Herc2Q4U2R1 Trmt13-210ENSMUST00000198454 880 ntBASIC12.5□□□□□ -0.41
Herc2Q4U2R1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Herc2Q4U2R1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Herc2Q4U2R1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Herc2Q4U2R1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Herc2Q4U2R1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Herc2Q4U2R1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Herc2Q4U2R1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Herc2Q4U2R1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Herc2Q4U2R1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Herc2Q4U2R1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Herc2Q4U2R1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Herc2Q4U2R1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Herc2Q4U2R1 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.48□□□□□ -0.41
Herc2Q4U2R1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.48□□□□□ -0.41
Herc2Q4U2R1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Herc2Q4U2R1 Gm9988-201ENSMUST00000069786 435 ntBASIC12.48□□□□□ -0.41
Herc2Q4U2R1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Herc2Q4U2R1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Herc2Q4U2R1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Herc2Q4U2R1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Herc2Q4U2R1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Herc2Q4U2R1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Herc2Q4U2R1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.48□□□□□ -0.41
Herc2Q4U2R1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Herc2Q4U2R1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Herc2Q4U2R1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Herc2Q4U2R1 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.48□□□□□ -0.41
Herc2Q4U2R1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Herc2Q4U2R1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Herc2Q4U2R1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Herc2Q4U2R1 Gm27741-201ENSMUST00000185060 237 ntBASIC12.47□□□□□ -0.41
Herc2Q4U2R1 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.47□□□□□ -0.41
Herc2Q4U2R1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC12.47□□□□□ -0.41
Herc2Q4U2R1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.47□□□□□ -0.41
Herc2Q4U2R1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Herc2Q4U2R1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Herc2Q4U2R1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Herc2Q4U2R1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Herc2Q4U2R1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC12.46□□□□□ -0.41
Herc2Q4U2R1 Gm43530-201ENSMUST00000195920 274 ntBASIC12.46□□□□□ -0.41
Herc2Q4U2R1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Herc2Q4U2R1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Herc2Q4U2R1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC12.46□□□□□ -0.41
Herc2Q4U2R1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.46□□□□□ -0.41
Herc2Q4U2R1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.46□□□□□ -0.41
Herc2Q4U2R1 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.46□□□□□ -0.41
Herc2Q4U2R1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Herc2Q4U2R1 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Herc2Q4U2R1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Herc2Q4U2R1 Amer2-203ENSMUST00000225247 2662 ntBASIC12.46□□□□□ -0.42
Herc2Q4U2R1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Herc2Q4U2R1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Herc2Q4U2R1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.45□□□□□ -0.42
Herc2Q4U2R1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC12.45□□□□□ -0.42
Herc2Q4U2R1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Herc2Q4U2R1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.45□□□□□ -0.42
Herc2Q4U2R1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Herc2Q4U2R1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Herc2Q4U2R1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Herc2Q4U2R1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC12.45□□□□□ -0.42
Herc2Q4U2R1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Herc2Q4U2R1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Herc2Q4U2R1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Herc2Q4U2R1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.45□□□□□ -0.42
Herc2Q4U2R1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Herc2Q4U2R1 Gm11421-201ENSMUST00000122124 294 ntBASIC12.45□□□□□ -0.42
Herc2Q4U2R1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC12.45□□□□□ -0.42
Herc2Q4U2R1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms