Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmem40Q4FJU9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmem40Q4FJU9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmem40Q4FJU9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Tmem40Q4FJU9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmem40Q4FJU9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tmem40Q4FJU9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.28■□□□□ 0.36
Tmem40Q4FJU9 Gm43017-201ENSMUST00000198296 752 ntBASIC17.28■□□□□ 0.36
Tmem40Q4FJU9 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.28■□□□□ 0.36
Tmem40Q4FJU9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tmem40Q4FJU9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Tmem40Q4FJU9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmem40Q4FJU9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tmem40Q4FJU9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Tmem40Q4FJU9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tmem40Q4FJU9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tmem40Q4FJU9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Tmem40Q4FJU9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tmem40Q4FJU9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tmem40Q4FJU9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.27■□□□□ 0.36
Tmem40Q4FJU9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.27■□□□□ 0.36
Tmem40Q4FJU9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.27■□□□□ 0.36
Tmem40Q4FJU9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.27■□□□□ 0.35
Tmem40Q4FJU9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tmem40Q4FJU9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tmem40Q4FJU9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem40Q4FJU9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Tmem40Q4FJU9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem40Q4FJU9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem40Q4FJU9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem40Q4FJU9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem40Q4FJU9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem40Q4FJU9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.26■□□□□ 0.35
Tmem40Q4FJU9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem40Q4FJU9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem40Q4FJU9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem40Q4FJU9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.26■□□□□ 0.35
Tmem40Q4FJU9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem40Q4FJU9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem40Q4FJU9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem40Q4FJU9 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.26■□□□□ 0.35
Tmem40Q4FJU9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem40Q4FJU9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tmem40Q4FJU9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tmem40Q4FJU9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
Tmem40Q4FJU9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Tmem40Q4FJU9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tmem40Q4FJU9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Tmem40Q4FJU9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tmem40Q4FJU9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tmem40Q4FJU9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tmem40Q4FJU9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tmem40Q4FJU9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Tmem40Q4FJU9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Tmem40Q4FJU9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tmem40Q4FJU9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Tmem40Q4FJU9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.24■□□□□ 0.35
Tmem40Q4FJU9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tmem40Q4FJU9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tmem40Q4FJU9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
Tmem40Q4FJU9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.24■□□□□ 0.35
Tmem40Q4FJU9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tmem40Q4FJU9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.23■□□□□ 0.35
Tmem40Q4FJU9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tmem40Q4FJU9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tmem40Q4FJU9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tmem40Q4FJU9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tmem40Q4FJU9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tmem40Q4FJU9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tmem40Q4FJU9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tmem40Q4FJU9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tmem40Q4FJU9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tmem40Q4FJU9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.22■□□□□ 0.35
Tmem40Q4FJU9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tmem40Q4FJU9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tmem40Q4FJU9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tmem40Q4FJU9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
Tmem40Q4FJU9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tmem40Q4FJU9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tmem40Q4FJU9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Tmem40Q4FJU9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Tmem40Q4FJU9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Tmem40Q4FJU9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tmem40Q4FJU9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tmem40Q4FJU9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.21■□□□□ 0.35
Tmem40Q4FJU9 Gm29257-201ENSMUST00000186115 639 ntBASIC17.21■□□□□ 0.35
Tmem40Q4FJU9 Gm8493-201ENSMUST00000196881 489 ntBASIC17.21■□□□□ 0.35
Tmem40Q4FJU9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tmem40Q4FJU9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tmem40Q4FJU9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Tmem40Q4FJU9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Tmem40Q4FJU9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.2■□□□□ 0.34
Tmem40Q4FJU9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tmem40Q4FJU9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tmem40Q4FJU9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.2■□□□□ 0.34
Tmem40Q4FJU9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
Tmem40Q4FJU9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Tmem40Q4FJU9 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.2■□□□□ 0.34
Tmem40Q4FJU9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
Tmem40Q4FJU9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 113.7 ms