Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Lsmem1Q3UQS2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Lsmem1Q3UQS2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lsmem1Q3UQS2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Lsmem1Q3UQS2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lsmem1Q3UQS2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lsmem1Q3UQS2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lsmem1Q3UQS2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lsmem1Q3UQS2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lsmem1Q3UQS2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.7■□□□□ 0.9
Lsmem1Q3UQS2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lsmem1Q3UQS2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lsmem1Q3UQS2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Lsmem1Q3UQS2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lsmem1Q3UQS2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lsmem1Q3UQS2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lsmem1Q3UQS2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.7■□□□□ 0.9
Lsmem1Q3UQS2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Lsmem1Q3UQS2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lsmem1Q3UQS2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lsmem1Q3UQS2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lsmem1Q3UQS2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lsmem1Q3UQS2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lsmem1Q3UQS2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Lsmem1Q3UQS2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lsmem1Q3UQS2 Gm9847-201ENSMUST00000052528 599 ntBASIC20.69■□□□□ 0.9
Lsmem1Q3UQS2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lsmem1Q3UQS2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
Lsmem1Q3UQS2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lsmem1Q3UQS2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Lsmem1Q3UQS2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsmem1Q3UQS2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsmem1Q3UQS2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsmem1Q3UQS2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsmem1Q3UQS2 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.68■□□□□ 0.9
Lsmem1Q3UQS2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsmem1Q3UQS2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsmem1Q3UQS2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.68■□□□□ 0.9
Lsmem1Q3UQS2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Lsmem1Q3UQS2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsmem1Q3UQS2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsmem1Q3UQS2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsmem1Q3UQS2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsmem1Q3UQS2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lsmem1Q3UQS2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lsmem1Q3UQS2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Lsmem1Q3UQS2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lsmem1Q3UQS2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lsmem1Q3UQS2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lsmem1Q3UQS2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lsmem1Q3UQS2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.67■□□□□ 0.9
Lsmem1Q3UQS2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lsmem1Q3UQS2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Lsmem1Q3UQS2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Lsmem1Q3UQS2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Lsmem1Q3UQS2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lsmem1Q3UQS2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lsmem1Q3UQS2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lsmem1Q3UQS2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lsmem1Q3UQS2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lsmem1Q3UQS2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lsmem1Q3UQS2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lsmem1Q3UQS2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Lsmem1Q3UQS2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Lsmem1Q3UQS2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lsmem1Q3UQS2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lsmem1Q3UQS2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lsmem1Q3UQS2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lsmem1Q3UQS2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Lsmem1Q3UQS2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Lsmem1Q3UQS2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lsmem1Q3UQS2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lsmem1Q3UQS2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.64■□□□□ 0.89
Lsmem1Q3UQS2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lsmem1Q3UQS2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lsmem1Q3UQS2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lsmem1Q3UQS2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.64■□□□□ 0.89
Lsmem1Q3UQS2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lsmem1Q3UQS2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lsmem1Q3UQS2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lsmem1Q3UQS2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Lsmem1Q3UQS2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lsmem1Q3UQS2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Lsmem1Q3UQS2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lsmem1Q3UQS2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lsmem1Q3UQS2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lsmem1Q3UQS2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lsmem1Q3UQS2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lsmem1Q3UQS2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lsmem1Q3UQS2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsmem1Q3UQS2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsmem1Q3UQS2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lsmem1Q3UQS2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Lsmem1Q3UQS2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsmem1Q3UQS2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lsmem1Q3UQS2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsmem1Q3UQS2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsmem1Q3UQS2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsmem1Q3UQS2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Lsmem1Q3UQS2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms