Protein–RNA interactions for Protein: Q3UKJ7

Smu1, WD40 repeat-containing protein SMU1, mousemouse

Known RBP Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smu1Q3UKJ7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smu1Q3UKJ7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smu1Q3UKJ7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smu1Q3UKJ7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.51■□□□□ 0.71
Smu1Q3UKJ7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.51■□□□□ 0.71
Smu1Q3UKJ7 Gm10399-202ENSMUST00000202768 748 ntBASIC19.51■□□□□ 0.71
Smu1Q3UKJ7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.51■□□□□ 0.71
Smu1Q3UKJ7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Smu1Q3UKJ7 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.51■□□□□ 0.71
Smu1Q3UKJ7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smu1Q3UKJ7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smu1Q3UKJ7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.5■□□□□ 0.71
Smu1Q3UKJ7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.5■□□□□ 0.71
Smu1Q3UKJ7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.5■□□□□ 0.71
Smu1Q3UKJ7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smu1Q3UKJ7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smu1Q3UKJ7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smu1Q3UKJ7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smu1Q3UKJ7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Smu1Q3UKJ7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smu1Q3UKJ7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smu1Q3UKJ7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smu1Q3UKJ7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smu1Q3UKJ7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smu1Q3UKJ7 Cap2-205ENSMUST00000225824 1634 ntBASIC19.49■□□□□ 0.71
Smu1Q3UKJ7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smu1Q3UKJ7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smu1Q3UKJ7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smu1Q3UKJ7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smu1Q3UKJ7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smu1Q3UKJ7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smu1Q3UKJ7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smu1Q3UKJ7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smu1Q3UKJ7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Smu1Q3UKJ7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.48■□□□□ 0.71
Smu1Q3UKJ7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smu1Q3UKJ7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smu1Q3UKJ7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smu1Q3UKJ7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.47■□□□□ 0.71
Smu1Q3UKJ7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smu1Q3UKJ7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Smu1Q3UKJ7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.47■□□□□ 0.71
Smu1Q3UKJ7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smu1Q3UKJ7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smu1Q3UKJ7 Gm5921-201ENSMUST00000075898 882 ntBASIC19.47■□□□□ 0.71
Smu1Q3UKJ7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smu1Q3UKJ7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smu1Q3UKJ7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smu1Q3UKJ7 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smu1Q3UKJ7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smu1Q3UKJ7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smu1Q3UKJ7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smu1Q3UKJ7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smu1Q3UKJ7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smu1Q3UKJ7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Smu1Q3UKJ7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Smu1Q3UKJ7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smu1Q3UKJ7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smu1Q3UKJ7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smu1Q3UKJ7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Smu1Q3UKJ7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smu1Q3UKJ7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smu1Q3UKJ7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smu1Q3UKJ7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.45■□□□□ 0.7
Smu1Q3UKJ7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.45■□□□□ 0.7
Smu1Q3UKJ7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smu1Q3UKJ7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Smu1Q3UKJ7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smu1Q3UKJ7 Gm13238-201ENSMUST00000117655 780 ntBASIC19.45■□□□□ 0.7
Smu1Q3UKJ7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Smu1Q3UKJ7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smu1Q3UKJ7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.45■□□□□ 0.7
Smu1Q3UKJ7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smu1Q3UKJ7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smu1Q3UKJ7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smu1Q3UKJ7 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.45■□□□□ 0.7
Smu1Q3UKJ7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smu1Q3UKJ7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smu1Q3UKJ7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smu1Q3UKJ7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smu1Q3UKJ7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smu1Q3UKJ7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smu1Q3UKJ7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smu1Q3UKJ7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smu1Q3UKJ7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Smu1Q3UKJ7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smu1Q3UKJ7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smu1Q3UKJ7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Smu1Q3UKJ7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smu1Q3UKJ7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smu1Q3UKJ7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smu1Q3UKJ7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.43■□□□□ 0.7
Smu1Q3UKJ7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smu1Q3UKJ7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smu1Q3UKJ7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smu1Q3UKJ7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Smu1Q3UKJ7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smu1Q3UKJ7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smu1Q3UKJ7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smu1Q3UKJ7 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms