Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC24.62■■□□□ 1.53
Col5a2Q3U962 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col5a2Q3U962 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col5a2Q3U962 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
Col5a2Q3U962 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col5a2Q3U962 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Col5a2Q3U962 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Col5a2Q3U962 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Col5a2Q3U962 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC24.61■■□□□ 1.53
Col5a2Q3U962 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Col5a2Q3U962 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Col5a2Q3U962 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC24.6■■□□□ 1.53
Col5a2Q3U962 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC24.6■■□□□ 1.53
Col5a2Q3U962 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
Col5a2Q3U962 Gm10602-201ENSMUST00000098239 609 ntBASIC24.6■■□□□ 1.53
Col5a2Q3U962 H3f3aos-201ENSMUST00000097448 2905 ntBASIC24.6■■□□□ 1.53
Col5a2Q3U962 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Col5a2Q3U962 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Col5a2Q3U962 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Col5a2Q3U962 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Col5a2Q3U962 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Col5a2Q3U962 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Col5a2Q3U962 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Col5a2Q3U962 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Col5a2Q3U962 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
Col5a2Q3U962 Gm27045-201ENSMUST00000182145 1402 ntBASIC24.59■■□□□ 1.53
Col5a2Q3U962 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Col5a2Q3U962 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Col5a2Q3U962 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Col5a2Q3U962 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Col5a2Q3U962 Nespas-201ENSMUST00000143738 1083 ntBASIC24.58■■□□□ 1.53
Col5a2Q3U962 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Col5a2Q3U962 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Col5a2Q3U962 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
Col5a2Q3U962 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
Col5a2Q3U962 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Col5a2Q3U962 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Col5a2Q3U962 Gm11421-201ENSMUST00000122124 294 ntBASIC24.58■■□□□ 1.52
Col5a2Q3U962 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Col5a2Q3U962 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC24.57■■□□□ 1.52
Col5a2Q3U962 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Col5a2Q3U962 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Col5a2Q3U962 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Col5a2Q3U962 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Col5a2Q3U962 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC24.56■■□□□ 1.52
Col5a2Q3U962 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC24.56■■□□□ 1.52
Col5a2Q3U962 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Col5a2Q3U962 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Col5a2Q3U962 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Col5a2Q3U962 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Col5a2Q3U962 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC24.55■■□□□ 1.52
Col5a2Q3U962 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Col5a2Q3U962 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC24.55■■□□□ 1.52
Col5a2Q3U962 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC24.55■■□□□ 1.52
Col5a2Q3U962 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Col5a2Q3U962 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Col5a2Q3U962 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Col5a2Q3U962 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Col5a2Q3U962 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col5a2Q3U962 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col5a2Q3U962 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col5a2Q3U962 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col5a2Q3U962 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Col5a2Q3U962 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Col5a2Q3U962 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Col5a2Q3U962 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC24.53■■□□□ 1.52
Col5a2Q3U962 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Col5a2Q3U962 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Col5a2Q3U962 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.53■■□□□ 1.52
Col5a2Q3U962 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col5a2Q3U962 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col5a2Q3U962 Gm14281-201ENSMUST00000121700 1294 ntBASIC24.52■■□□□ 1.52
Col5a2Q3U962 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col5a2Q3U962 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col5a2Q3U962 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Col5a2Q3U962 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col5a2Q3U962 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Col5a2Q3U962 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Col5a2Q3U962 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Col5a2Q3U962 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Col5a2Q3U962 Gm10653-202ENSMUST00000139570 835 ntBASIC24.51■■□□□ 1.51
Col5a2Q3U962 Gm42778-201ENSMUST00000199644 553 ntBASIC24.51■■□□□ 1.51
Col5a2Q3U962 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
Col5a2Q3U962 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Col5a2Q3U962 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Col5a2Q3U962 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Col5a2Q3U962 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Col5a2Q3U962 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC24.51■■□□□ 1.51
Col5a2Q3U962 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Col5a2Q3U962 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Col5a2Q3U962 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Col5a2Q3U962 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Col5a2Q3U962 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Col5a2Q3U962 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC24.5■■□□□ 1.51
Col5a2Q3U962 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC24.5■■□□□ 1.51
Col5a2Q3U962 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
Col5a2Q3U962 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Col5a2Q3U962 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Col5a2Q3U962 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Col5a2Q3U962 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms