Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssbp4Q3U4B1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssbp4Q3U4B1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ssbp4Q3U4B1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.09■□□□□ 0.33
Ssbp4Q3U4B1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.09■□□□□ 0.33
Ssbp4Q3U4B1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssbp4Q3U4B1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ssbp4Q3U4B1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
Ssbp4Q3U4B1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ssbp4Q3U4B1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ssbp4Q3U4B1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ssbp4Q3U4B1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ssbp4Q3U4B1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ssbp4Q3U4B1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssbp4Q3U4B1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.08■□□□□ 0.32
Ssbp4Q3U4B1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ssbp4Q3U4B1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Ssbp4Q3U4B1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssbp4Q3U4B1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssbp4Q3U4B1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssbp4Q3U4B1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssbp4Q3U4B1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ssbp4Q3U4B1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ssbp4Q3U4B1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssbp4Q3U4B1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssbp4Q3U4B1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Ssbp4Q3U4B1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssbp4Q3U4B1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssbp4Q3U4B1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssbp4Q3U4B1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssbp4Q3U4B1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssbp4Q3U4B1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.06■□□□□ 0.32
Ssbp4Q3U4B1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ssbp4Q3U4B1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Ssbp4Q3U4B1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ssbp4Q3U4B1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssbp4Q3U4B1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ssbp4Q3U4B1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssbp4Q3U4B1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssbp4Q3U4B1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ssbp4Q3U4B1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.06■□□□□ 0.32
Ssbp4Q3U4B1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.06■□□□□ 0.32
Ssbp4Q3U4B1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ssbp4Q3U4B1 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.06■□□□□ 0.32
Ssbp4Q3U4B1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
Ssbp4Q3U4B1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssbp4Q3U4B1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssbp4Q3U4B1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssbp4Q3U4B1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssbp4Q3U4B1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssbp4Q3U4B1 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.05■□□□□ 0.32
Ssbp4Q3U4B1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssbp4Q3U4B1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssbp4Q3U4B1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssbp4Q3U4B1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ssbp4Q3U4B1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssbp4Q3U4B1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ssbp4Q3U4B1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ssbp4Q3U4B1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ssbp4Q3U4B1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssbp4Q3U4B1 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.05■□□□□ 0.32
Ssbp4Q3U4B1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.05■□□□□ 0.32
Ssbp4Q3U4B1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ssbp4Q3U4B1 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.04■□□□□ 0.32
Ssbp4Q3U4B1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ssbp4Q3U4B1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ssbp4Q3U4B1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssbp4Q3U4B1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.04■□□□□ 0.32
Ssbp4Q3U4B1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssbp4Q3U4B1 Gm43017-201ENSMUST00000198296 752 ntBASIC17.04■□□□□ 0.32
Ssbp4Q3U4B1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssbp4Q3U4B1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssbp4Q3U4B1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssbp4Q3U4B1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssbp4Q3U4B1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssbp4Q3U4B1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssbp4Q3U4B1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssbp4Q3U4B1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssbp4Q3U4B1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Ssbp4Q3U4B1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ssbp4Q3U4B1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.03■□□□□ 0.32
Ssbp4Q3U4B1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Ssbp4Q3U4B1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.03■□□□□ 0.32
Ssbp4Q3U4B1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Ssbp4Q3U4B1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.03■□□□□ 0.32
Ssbp4Q3U4B1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssbp4Q3U4B1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.03■□□□□ 0.32
Ssbp4Q3U4B1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssbp4Q3U4B1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssbp4Q3U4B1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Ssbp4Q3U4B1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssbp4Q3U4B1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssbp4Q3U4B1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ssbp4Q3U4B1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ssbp4Q3U4B1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.02■□□□□ 0.32
Ssbp4Q3U4B1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ssbp4Q3U4B1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.02■□□□□ 0.32
Ssbp4Q3U4B1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ssbp4Q3U4B1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ssbp4Q3U4B1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms