Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Q3U1D9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Q3U1D9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Q3U1D9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Q3U1D9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q3U1D9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Q3U1D9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Q3U1D9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Q3U1D9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q3U1D9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q3U1D9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.68■□□□□ 0.42
Q3U1D9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q3U1D9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.68■□□□□ 0.42
Q3U1D9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.68■□□□□ 0.42
Q3U1D9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q3U1D9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Q3U1D9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Q3U1D9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Q3U1D9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Q3U1D9 Gm8493-201ENSMUST00000196881 489 ntBASIC17.67■□□□□ 0.42
Q3U1D9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Q3U1D9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.67■□□□□ 0.42
Q3U1D9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Q3U1D9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Q3U1D9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q3U1D9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q3U1D9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q3U1D9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q3U1D9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q3U1D9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Q3U1D9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q3U1D9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
Q3U1D9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Q3U1D9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Q3U1D9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.65■□□□□ 0.42
Q3U1D9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Q3U1D9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Q3U1D9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Q3U1D9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Q3U1D9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Q3U1D9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Q3U1D9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.65■□□□□ 0.42
Q3U1D9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Q3U1D9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Q3U1D9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Q3U1D9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Q3U1D9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Q3U1D9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Q3U1D9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Q3U1D9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Q3U1D9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Q3U1D9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Q3U1D9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Q3U1D9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Q3U1D9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Q3U1D9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.64■□□□□ 0.41
Q3U1D9 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.64■□□□□ 0.41
Q3U1D9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Q3U1D9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Q3U1D9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q3U1D9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.63■□□□□ 0.41
Q3U1D9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.63■□□□□ 0.41
Q3U1D9 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.63■□□□□ 0.41
Q3U1D9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
Q3U1D9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Q3U1D9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Q3U1D9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q3U1D9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q3U1D9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.62■□□□□ 0.41
Q3U1D9 Gm43017-201ENSMUST00000198296 752 ntBASIC17.62■□□□□ 0.41
Q3U1D9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.62■□□□□ 0.41
Q3U1D9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q3U1D9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q3U1D9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q3U1D9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Q3U1D9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q3U1D9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q3U1D9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q3U1D9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q3U1D9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q3U1D9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q3U1D9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q3U1D9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Q3U1D9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.6■□□□□ 0.41
Q3U1D9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.6■□□□□ 0.41
Q3U1D9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Q3U1D9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q3U1D9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Q3U1D9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Q3U1D9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.6■□□□□ 0.41
Q3U1D9 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.6■□□□□ 0.41
Q3U1D9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q3U1D9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Q3U1D9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q3U1D9 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.6■□□□□ 0.41
Q3U1D9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Q3U1D9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Q3U1D9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q3U1D9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Q3U1D9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms