Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.72■□□□□ 0.91
Smad4P97471 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Smad4P97471 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smad4P97471 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smad4P97471 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smad4P97471 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smad4P97471 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.71■□□□□ 0.91
Smad4P97471 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smad4P97471 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smad4P97471 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smad4P97471 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Smad4P97471 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.7■□□□□ 0.9
Smad4P97471 Gm20760-201ENSMUST00000179197 648 ntBASIC20.7■□□□□ 0.9
Smad4P97471 Gm10252-201ENSMUST00000209541 832 ntBASIC20.7■□□□□ 0.9
Smad4P97471 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.7■□□□□ 0.9
Smad4P97471 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smad4P97471 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.7■□□□□ 0.9
Smad4P97471 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smad4P97471 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.7■□□□□ 0.9
Smad4P97471 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smad4P97471 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.69■□□□□ 0.9
Smad4P97471 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.69■□□□□ 0.9
Smad4P97471 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Smad4P97471 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.69■□□□□ 0.9
Smad4P97471 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Smad4P97471 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smad4P97471 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smad4P97471 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smad4P97471 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.68■□□□□ 0.9
Smad4P97471 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smad4P97471 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Smad4P97471 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Smad4P97471 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Smad4P97471 Mir5133-201ENSMUST00000174955 77 ntBASIC20.67■□□□□ 0.9
Smad4P97471 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smad4P97471 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.67■□□□□ 0.9
Smad4P97471 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smad4P97471 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smad4P97471 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smad4P97471 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
Smad4P97471 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smad4P97471 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smad4P97471 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Smad4P97471 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Smad4P97471 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.66■□□□□ 0.9
Smad4P97471 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.66■□□□□ 0.9
Smad4P97471 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smad4P97471 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smad4P97471 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smad4P97471 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smad4P97471 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Smad4P97471 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smad4P97471 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smad4P97471 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smad4P97471 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Smad4P97471 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Smad4P97471 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smad4P97471 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.64■□□□□ 0.9
Smad4P97471 Reep4-203ENSMUST00000226563 1444 ntBASIC20.64■□□□□ 0.89
Smad4P97471 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smad4P97471 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.64■□□□□ 0.89
Smad4P97471 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Smad4P97471 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smad4P97471 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smad4P97471 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smad4P97471 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smad4P97471 Gm8520-201ENSMUST00000186517 868 ntBASIC20.63■□□□□ 0.89
Smad4P97471 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.63■□□□□ 0.89
Smad4P97471 Gm7514-201ENSMUST00000209475 934 ntBASIC20.63■□□□□ 0.89
Smad4P97471 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Smad4P97471 Gm4968-201ENSMUST00000071458 858 ntBASIC20.63■□□□□ 0.89
Smad4P97471 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smad4P97471 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smad4P97471 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smad4P97471 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smad4P97471 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smad4P97471 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smad4P97471 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smad4P97471 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Smad4P97471 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smad4P97471 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smad4P97471 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.61■□□□□ 0.89
Smad4P97471 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Smad4P97471 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smad4P97471 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smad4P97471 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smad4P97471 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smad4P97471 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smad4P97471 Mir7071-201ENSMUST00000184847 69 ntBASIC20.6■□□□□ 0.89
Smad4P97471 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smad4P97471 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smad4P97471 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smad4P97471 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smad4P97471 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smad4P97471 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.59■□□□□ 0.89
Smad4P97471 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smad4P97471 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smad4P97471 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smad4P97471 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.59■□□□□ 0.89
Smad4P97471 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms