Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.32□□□□□ -0.12
PrkdcP97313 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.32□□□□□ -0.12
PrkdcP97313 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
PrkdcP97313 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PrkdcP97313 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.32□□□□□ -0.12
PrkdcP97313 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.32□□□□□ -0.12
PrkdcP97313 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PrkdcP97313 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PrkdcP97313 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PrkdcP97313 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PrkdcP97313 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PrkdcP97313 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PrkdcP97313 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PrkdcP97313 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PrkdcP97313 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.31□□□□□ -0.12
PrkdcP97313 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PrkdcP97313 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PrkdcP97313 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PrkdcP97313 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PrkdcP97313 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PrkdcP97313 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PrkdcP97313 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PrkdcP97313 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PrkdcP97313 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PrkdcP97313 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PrkdcP97313 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PrkdcP97313 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
PrkdcP97313 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
PrkdcP97313 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PrkdcP97313 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PrkdcP97313 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.3□□□□□ -0.12
PrkdcP97313 Gm7514-201ENSMUST00000209475 934 ntBASIC14.3□□□□□ -0.12
PrkdcP97313 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
PrkdcP97313 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PrkdcP97313 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
PrkdcP97313 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.29□□□□□ -0.12
PrkdcP97313 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
PrkdcP97313 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PrkdcP97313 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PrkdcP97313 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.29□□□□□ -0.12
PrkdcP97313 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.29□□□□□ -0.12
PrkdcP97313 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PrkdcP97313 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PrkdcP97313 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PrkdcP97313 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PrkdcP97313 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PrkdcP97313 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PrkdcP97313 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PrkdcP97313 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PrkdcP97313 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PrkdcP97313 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PrkdcP97313 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.28□□□□□ -0.12
PrkdcP97313 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PrkdcP97313 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PrkdcP97313 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC14.28□□□□□ -0.12
PrkdcP97313 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PrkdcP97313 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.28□□□□□ -0.12
PrkdcP97313 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PrkdcP97313 Gm13234-201ENSMUST00000120010 747 ntBASIC14.28□□□□□ -0.12
PrkdcP97313 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.28□□□□□ -0.12
PrkdcP97313 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.28□□□□□ -0.12
PrkdcP97313 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PrkdcP97313 Gm13836-201ENSMUST00000121159 501 ntBASIC14.27□□□□□ -0.12
PrkdcP97313 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.27□□□□□ -0.12
PrkdcP97313 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
PrkdcP97313 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PrkdcP97313 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PrkdcP97313 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PrkdcP97313 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PrkdcP97313 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PrkdcP97313 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.26□□□□□ -0.13
PrkdcP97313 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PrkdcP97313 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PrkdcP97313 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PrkdcP97313 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.26□□□□□ -0.13
PrkdcP97313 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.26□□□□□ -0.13
PrkdcP97313 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
PrkdcP97313 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PrkdcP97313 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PrkdcP97313 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PrkdcP97313 Gm11421-201ENSMUST00000122124 294 ntBASIC14.26□□□□□ -0.13
PrkdcP97313 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PrkdcP97313 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PrkdcP97313 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PrkdcP97313 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PrkdcP97313 Gm715-201ENSMUST00000117865 831 ntBASIC14.25□□□□□ -0.13
PrkdcP97313 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PrkdcP97313 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PrkdcP97313 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PrkdcP97313 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PrkdcP97313 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PrkdcP97313 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PrkdcP97313 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC14.25□□□□□ -0.13
PrkdcP97313 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PrkdcP97313 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
PrkdcP97313 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PrkdcP97313 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.24□□□□□ -0.13
PrkdcP97313 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.24□□□□□ -0.13
PrkdcP97313 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
PrkdcP97313 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms