Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Gm11421-201ENSMUST00000122124 294 ntBASIC17.07■□□□□ 0.32
Usp9xP70398 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp9xP70398 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Usp9xP70398 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp9xP70398 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.06■□□□□ 0.32
Usp9xP70398 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp9xP70398 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp9xP70398 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp9xP70398 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp9xP70398 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.06■□□□□ 0.32
Usp9xP70398 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Usp9xP70398 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp9xP70398 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp9xP70398 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Usp9xP70398 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp9xP70398 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.06■□□□□ 0.32
Usp9xP70398 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.06■□□□□ 0.32
Usp9xP70398 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp9xP70398 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp9xP70398 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp9xP70398 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp9xP70398 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp9xP70398 Gm27801-201ENSMUST00000184174 223 ntBASIC17.05■□□□□ 0.32
Usp9xP70398 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.05■□□□□ 0.32
Usp9xP70398 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Usp9xP70398 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp9xP70398 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Usp9xP70398 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp9xP70398 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.05■□□□□ 0.32
Usp9xP70398 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp9xP70398 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp9xP70398 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp9xP70398 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp9xP70398 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp9xP70398 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp9xP70398 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Usp9xP70398 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.04■□□□□ 0.32
Usp9xP70398 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp9xP70398 Reep4-203ENSMUST00000226563 1444 ntBASIC17.04■□□□□ 0.32
Usp9xP70398 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.04■□□□□ 0.32
Usp9xP70398 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp9xP70398 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp9xP70398 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp9xP70398 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp9xP70398 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp9xP70398 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.04■□□□□ 0.32
Usp9xP70398 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp9xP70398 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp9xP70398 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.03■□□□□ 0.32
Usp9xP70398 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp9xP70398 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp9xP70398 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Usp9xP70398 Gm8520-201ENSMUST00000186517 868 ntBASIC17.03■□□□□ 0.32
Usp9xP70398 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp9xP70398 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp9xP70398 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Usp9xP70398 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Usp9xP70398 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Usp9xP70398 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Usp9xP70398 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.01■□□□□ 0.31
Usp9xP70398 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp9xP70398 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.01■□□□□ 0.31
Usp9xP70398 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp9xP70398 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp9xP70398 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Usp9xP70398 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp9xP70398 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp9xP70398 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17■□□□□ 0.31
Usp9xP70398 Gm13234-201ENSMUST00000120010 747 ntBASIC17■□□□□ 0.31
Usp9xP70398 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Usp9xP70398 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17■□□□□ 0.31
Usp9xP70398 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp9xP70398 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Usp9xP70398 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp9xP70398 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp9xP70398 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp9xP70398 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp9xP70398 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Usp9xP70398 Gm14281-201ENSMUST00000121700 1294 ntBASIC17■□□□□ 0.31
Usp9xP70398 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17■□□□□ 0.31
Usp9xP70398 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17■□□□□ 0.31
Usp9xP70398 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Usp9xP70398 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Usp9xP70398 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
Usp9xP70398 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp9xP70398 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp9xP70398 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Usp9xP70398 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Usp9xP70398 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp9xP70398 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.99■□□□□ 0.31
Usp9xP70398 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.99■□□□□ 0.31
Usp9xP70398 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.99■□□□□ 0.31
Usp9xP70398 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Usp9xP70398 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Usp9xP70398 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.98■□□□□ 0.31
Usp9xP70398 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Usp9xP70398 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp9xP70398 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp9xP70398 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp9xP70398 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms