Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pdlim4P70271 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim4P70271 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim4P70271 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.83■□□□□ 0.28
Pdlim4P70271 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.83■□□□□ 0.28
Pdlim4P70271 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim4P70271 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.83■□□□□ 0.28
Pdlim4P70271 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim4P70271 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim4P70271 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim4P70271 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim4P70271 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pdlim4P70271 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim4P70271 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim4P70271 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim4P70271 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim4P70271 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim4P70271 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.82■□□□□ 0.28
Pdlim4P70271 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdlim4P70271 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.81■□□□□ 0.28
Pdlim4P70271 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdlim4P70271 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pdlim4P70271 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pdlim4P70271 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.81■□□□□ 0.28
Pdlim4P70271 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.81■□□□□ 0.28
Pdlim4P70271 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Pdlim4P70271 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.81■□□□□ 0.28
Pdlim4P70271 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.81■□□□□ 0.28
Pdlim4P70271 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdlim4P70271 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.81■□□□□ 0.28
Pdlim4P70271 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdlim4P70271 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdlim4P70271 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim4P70271 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.8■□□□□ 0.28
Pdlim4P70271 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Pdlim4P70271 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim4P70271 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim4P70271 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim4P70271 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim4P70271 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim4P70271 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim4P70271 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pdlim4P70271 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim4P70271 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim4P70271 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim4P70271 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim4P70271 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim4P70271 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
Pdlim4P70271 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim4P70271 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.79■□□□□ 0.28
Pdlim4P70271 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.79■□□□□ 0.28
Pdlim4P70271 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
Pdlim4P70271 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Pdlim4P70271 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim4P70271 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim4P70271 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Pdlim4P70271 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim4P70271 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim4P70271 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim4P70271 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim4P70271 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.78■□□□□ 0.28
Pdlim4P70271 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim4P70271 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
Pdlim4P70271 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Pdlim4P70271 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pdlim4P70271 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.77■□□□□ 0.28
Pdlim4P70271 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pdlim4P70271 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pdlim4P70271 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Pdlim4P70271 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pdlim4P70271 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pdlim4P70271 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pdlim4P70271 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pdlim4P70271 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Pdlim4P70271 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pdlim4P70271 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.76■□□□□ 0.27
Pdlim4P70271 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.76■□□□□ 0.27
Pdlim4P70271 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
Pdlim4P70271 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.76■□□□□ 0.27
Pdlim4P70271 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim4P70271 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim4P70271 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pdlim4P70271 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim4P70271 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim4P70271 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim4P70271 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim4P70271 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim4P70271 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim4P70271 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.75■□□□□ 0.27
Pdlim4P70271 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim4P70271 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Pdlim4P70271 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pdlim4P70271 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim4P70271 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim4P70271 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim4P70271 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim4P70271 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim4P70271 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.74■□□□□ 0.27
Pdlim4P70271 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim4P70271 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms