Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC14.47□□□□□ -0.09
Rpl39P62892 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC14.47□□□□□ -0.09
Rpl39P62892 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC14.47□□□□□ -0.09
Rpl39P62892 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpl39P62892 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpl39P62892 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpl39P62892 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rpl39P62892 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpl39P62892 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rpl39P62892 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rpl39P62892 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpl39P62892 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpl39P62892 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpl39P62892 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpl39P62892 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Rpl39P62892 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpl39P62892 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpl39P62892 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpl39P62892 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rpl39P62892 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Rpl39P62892 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rpl39P62892 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.46□□□□□ -0.1
Rpl39P62892 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rpl39P62892 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC14.45□□□□□ -0.1
Rpl39P62892 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpl39P62892 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Rpl39P62892 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rpl39P62892 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rpl39P62892 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpl39P62892 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpl39P62892 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rpl39P62892 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpl39P62892 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rpl39P62892 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpl39P62892 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpl39P62892 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rpl39P62892 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpl39P62892 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.44□□□□□ -0.1
Rpl39P62892 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rpl39P62892 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpl39P62892 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC14.44□□□□□ -0.1
Rpl39P62892 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rpl39P62892 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl39P62892 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl39P62892 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl39P62892 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Rpl39P62892 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC14.43□□□□□ -0.1
Rpl39P62892 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl39P62892 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.43□□□□□ -0.1
Rpl39P62892 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl39P62892 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl39P62892 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rpl39P62892 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl39P62892 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Rpl39P62892 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl39P62892 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl39P62892 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl39P62892 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl39P62892 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl39P62892 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl39P62892 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl39P62892 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl39P62892 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.42□□□□□ -0.1
Rpl39P62892 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rpl39P62892 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl39P62892 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl39P62892 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl39P62892 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl39P62892 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl39P62892 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl39P62892 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC14.41□□□□□ -0.1
Rpl39P62892 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl39P62892 Gm11687-201ENSMUST00000118911 886 ntBASIC14.41□□□□□ -0.1
Rpl39P62892 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl39P62892 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.41□□□□□ -0.1
Rpl39P62892 AC116713.1-201ENSMUST00000215074 430 ntBASIC14.41□□□□□ -0.1
Rpl39P62892 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl39P62892 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl39P62892 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl39P62892 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl39P62892 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl39P62892 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl39P62892 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl39P62892 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rpl39P62892 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rpl39P62892 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl39P62892 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl39P62892 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl39P62892 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl39P62892 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl39P62892 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl39P62892 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl39P62892 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Rpl39P62892 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl39P62892 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl39P62892 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl39P62892 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl39P62892 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl39P62892 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl39P62892 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms