Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp46P62069 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Usp46P62069 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.24■□□□□ 0.99
Usp46P62069 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp46P62069 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Usp46P62069 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Usp46P62069 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Usp46P62069 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp46P62069 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Usp46P62069 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Usp46P62069 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp46P62069 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Usp46P62069 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.23■□□□□ 0.99
Usp46P62069 Gm43137-201ENSMUST00000198052 594 ntBASIC21.23■□□□□ 0.99
Usp46P62069 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp46P62069 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Usp46P62069 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp46P62069 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp46P62069 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp46P62069 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.22■□□□□ 0.99
Usp46P62069 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp46P62069 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Usp46P62069 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp46P62069 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp46P62069 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp46P62069 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.22■□□□□ 0.99
Usp46P62069 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp46P62069 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp46P62069 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.21■□□□□ 0.99
Usp46P62069 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp46P62069 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp46P62069 Gm43530-201ENSMUST00000195920 274 ntBASIC21.21■□□□□ 0.99
Usp46P62069 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp46P62069 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Usp46P62069 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Usp46P62069 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Usp46P62069 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp46P62069 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.21■□□□□ 0.99
Usp46P62069 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Usp46P62069 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp46P62069 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Usp46P62069 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Usp46P62069 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp46P62069 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp46P62069 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Usp46P62069 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.2■□□□□ 0.98
Usp46P62069 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Usp46P62069 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp46P62069 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp46P62069 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Usp46P62069 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp46P62069 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp46P62069 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp46P62069 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.19■□□□□ 0.98
Usp46P62069 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp46P62069 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp46P62069 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.18■□□□□ 0.98
Usp46P62069 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Usp46P62069 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp46P62069 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp46P62069 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Usp46P62069 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp46P62069 Serp2-204ENSMUST00000228055 705 ntBASIC21.18■□□□□ 0.98
Usp46P62069 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp46P62069 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp46P62069 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.18■□□□□ 0.98
Usp46P62069 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Usp46P62069 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Usp46P62069 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.17■□□□□ 0.98
Usp46P62069 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp46P62069 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Usp46P62069 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp46P62069 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp46P62069 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Usp46P62069 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp46P62069 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp46P62069 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.16■□□□□ 0.98
Usp46P62069 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Usp46P62069 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp46P62069 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.16■□□□□ 0.98
Usp46P62069 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Usp46P62069 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp46P62069 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp46P62069 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Usp46P62069 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Usp46P62069 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp46P62069 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.15■□□□□ 0.98
Usp46P62069 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Usp46P62069 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp46P62069 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp46P62069 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp46P62069 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Usp46P62069 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.14■□□□□ 0.98
Usp46P62069 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.14■□□□□ 0.97
Usp46P62069 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp46P62069 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Usp46P62069 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp46P62069 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp46P62069 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Usp46P62069 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 133.6 ms