Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sec61a1P61620 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sec61a1P61620 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sec61a1P61620 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sec61a1P61620 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sec61a1P61620 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sec61a1P61620 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sec61a1P61620 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sec61a1P61620 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Sec61a1P61620 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sec61a1P61620 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Sec61a1P61620 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sec61a1P61620 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sec61a1P61620 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.73■□□□□ 0.43
Sec61a1P61620 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sec61a1P61620 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Sec61a1P61620 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sec61a1P61620 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.73■□□□□ 0.43
Sec61a1P61620 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sec61a1P61620 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sec61a1P61620 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sec61a1P61620 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sec61a1P61620 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.72■□□□□ 0.43
Sec61a1P61620 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.72■□□□□ 0.43
Sec61a1P61620 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.72■□□□□ 0.43
Sec61a1P61620 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sec61a1P61620 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.72■□□□□ 0.43
Sec61a1P61620 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.72■□□□□ 0.43
Sec61a1P61620 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sec61a1P61620 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sec61a1P61620 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sec61a1P61620 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.71■□□□□ 0.43
Sec61a1P61620 Rps24-207ENSMUST00000224568 714 ntBASIC17.71■□□□□ 0.43
Sec61a1P61620 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sec61a1P61620 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sec61a1P61620 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sec61a1P61620 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sec61a1P61620 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sec61a1P61620 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sec61a1P61620 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sec61a1P61620 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sec61a1P61620 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sec61a1P61620 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sec61a1P61620 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sec61a1P61620 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.7■□□□□ 0.42
Sec61a1P61620 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sec61a1P61620 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sec61a1P61620 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sec61a1P61620 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Sec61a1P61620 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sec61a1P61620 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sec61a1P61620 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sec61a1P61620 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sec61a1P61620 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sec61a1P61620 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sec61a1P61620 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sec61a1P61620 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.69■□□□□ 0.42
Sec61a1P61620 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sec61a1P61620 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sec61a1P61620 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.69■□□□□ 0.42
Sec61a1P61620 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sec61a1P61620 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sec61a1P61620 Gm9959-201ENSMUST00000068277 390 ntBASIC17.69■□□□□ 0.42
Sec61a1P61620 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sec61a1P61620 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sec61a1P61620 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sec61a1P61620 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.68■□□□□ 0.42
Sec61a1P61620 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sec61a1P61620 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sec61a1P61620 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sec61a1P61620 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.68■□□□□ 0.42
Sec61a1P61620 Gm14117-201ENSMUST00000122417 843 ntBASIC17.68■□□□□ 0.42
Sec61a1P61620 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.68■□□□□ 0.42
Sec61a1P61620 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.68■□□□□ 0.42
Sec61a1P61620 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sec61a1P61620 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sec61a1P61620 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sec61a1P61620 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sec61a1P61620 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.67■□□□□ 0.42
Sec61a1P61620 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Sec61a1P61620 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sec61a1P61620 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sec61a1P61620 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sec61a1P61620 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sec61a1P61620 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sec61a1P61620 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sec61a1P61620 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sec61a1P61620 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sec61a1P61620 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.66■□□□□ 0.42
Sec61a1P61620 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sec61a1P61620 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Sec61a1P61620 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sec61a1P61620 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sec61a1P61620 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sec61a1P61620 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Sec61a1P61620 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec61a1P61620 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec61a1P61620 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.65■□□□□ 0.42
Sec61a1P61620 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Sec61a1P61620 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms