Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cks1bP61025 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cks1bP61025 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.37□□□□□ -0.11
Cks1bP61025 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cks1bP61025 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC14.36□□□□□ -0.11
Cks1bP61025 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC14.36□□□□□ -0.11
Cks1bP61025 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cks1bP61025 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cks1bP61025 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC14.36□□□□□ -0.11
Cks1bP61025 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cks1bP61025 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC14.36□□□□□ -0.11
Cks1bP61025 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cks1bP61025 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cks1bP61025 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Cks1bP61025 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cks1bP61025 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cks1bP61025 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cks1bP61025 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cks1bP61025 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cks1bP61025 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cks1bP61025 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Cks1bP61025 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cks1bP61025 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Cks1bP61025 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cks1bP61025 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cks1bP61025 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cks1bP61025 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cks1bP61025 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cks1bP61025 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cks1bP61025 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cks1bP61025 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC14.34□□□□□ -0.11
Cks1bP61025 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cks1bP61025 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cks1bP61025 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cks1bP61025 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cks1bP61025 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cks1bP61025 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cks1bP61025 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Cks1bP61025 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cks1bP61025 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cks1bP61025 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cks1bP61025 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cks1bP61025 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cks1bP61025 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cks1bP61025 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cks1bP61025 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cks1bP61025 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cks1bP61025 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cks1bP61025 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cks1bP61025 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC14.32□□□□□ -0.12
Cks1bP61025 AC167019.3-201ENSMUST00000228225 1266 ntBASIC14.32□□□□□ -0.12
Cks1bP61025 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cks1bP61025 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cks1bP61025 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cks1bP61025 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cks1bP61025 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cks1bP61025 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cks1bP61025 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cks1bP61025 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cks1bP61025 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cks1bP61025 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cks1bP61025 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cks1bP61025 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cks1bP61025 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cks1bP61025 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Cks1bP61025 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cks1bP61025 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC14.31□□□□□ -0.12
Cks1bP61025 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cks1bP61025 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cks1bP61025 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cks1bP61025 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
Cks1bP61025 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Cks1bP61025 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks1bP61025 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks1bP61025 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks1bP61025 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cks1bP61025 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks1bP61025 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cks1bP61025 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks1bP61025 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cks1bP61025 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks1bP61025 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks1bP61025 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.3□□□□□ -0.12
Cks1bP61025 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cks1bP61025 AC117245.4-201ENSMUST00000217388 1646 ntBASIC14.3□□□□□ -0.12
Cks1bP61025 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks1bP61025 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks1bP61025 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks1bP61025 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC14.29□□□□□ -0.12
Cks1bP61025 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks1bP61025 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks1bP61025 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC14.29□□□□□ -0.12
Cks1bP61025 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks1bP61025 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks1bP61025 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.29□□□□□ -0.12
Cks1bP61025 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks1bP61025 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks1bP61025 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks1bP61025 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks1bP61025 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms