Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Msh6P54276 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Msh6P54276 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Msh6P54276 Gm32051-202ENSMUST00000197905 2385 ntBASIC26.15■■□□□ 1.78
Msh6P54276 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Msh6P54276 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Msh6P54276 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Msh6P54276 Gm10493-201ENSMUST00000097270 612 ntBASIC26.15■■□□□ 1.78
Msh6P54276 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC26.15■■□□□ 1.78
Msh6P54276 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC26.14■■□□□ 1.78
Msh6P54276 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
Msh6P54276 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC26.14■■□□□ 1.77
Msh6P54276 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Msh6P54276 Dmtn-209ENSMUST00000228295 2572 ntBASIC26.13■■□□□ 1.77
Msh6P54276 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Msh6P54276 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Msh6P54276 Gm26833-201ENSMUST00000180899 440 ntBASIC26.13■■□□□ 1.77
Msh6P54276 Gm27405-201ENSMUST00000184201 112 ntBASIC26.13■■□□□ 1.77
Msh6P54276 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Msh6P54276 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Msh6P54276 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Msh6P54276 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Msh6P54276 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Msh6P54276 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Msh6P54276 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
Msh6P54276 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Msh6P54276 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Msh6P54276 Gm7160-202ENSMUST00000188519 1027 ntBASIC26.12■■□□□ 1.77
Msh6P54276 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC26.12■■□□□ 1.77
Msh6P54276 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC26.12■■□□□ 1.77
Msh6P54276 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Msh6P54276 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Msh6P54276 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC26.11■■□□□ 1.77
Msh6P54276 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC26.11■■□□□ 1.77
Msh6P54276 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Msh6P54276 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC26.11■■□□□ 1.77
Msh6P54276 Gm5913-201ENSMUST00000119397 1399 ntBASIC26.1■■□□□ 1.77
Msh6P54276 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC26.1■■□□□ 1.77
Msh6P54276 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Msh6P54276 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Msh6P54276 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Msh6P54276 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Msh6P54276 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Msh6P54276 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
Msh6P54276 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Msh6P54276 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
Msh6P54276 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Msh6P54276 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Msh6P54276 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC26.09■■□□□ 1.77
Msh6P54276 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC26.09■■□□□ 1.77
Msh6P54276 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC26.09■■□□□ 1.77
Msh6P54276 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Msh6P54276 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Msh6P54276 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Msh6P54276 Gm44949-201ENSMUST00000206423 1450 ntBASIC26.09■■□□□ 1.77
Msh6P54276 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
Msh6P54276 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC26.08■■□□□ 1.77
Msh6P54276 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC26.08■■□□□ 1.77
Msh6P54276 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Msh6P54276 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Msh6P54276 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Msh6P54276 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC26.07■■□□□ 1.76
Msh6P54276 Gm43530-201ENSMUST00000195920 274 ntBASIC26.07■■□□□ 1.76
Msh6P54276 Gm43060-201ENSMUST00000200621 289 ntBASIC26.07■■□□□ 1.76
Msh6P54276 Spcs1-207ENSMUST00000228767 1008 ntBASIC26.07■■□□□ 1.76
Msh6P54276 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Msh6P54276 AC166356.1-201ENSMUST00000228236 1426 ntBASIC26.07■■□□□ 1.76
Msh6P54276 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
Msh6P54276 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Msh6P54276 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC26.07■■□□□ 1.76
Msh6P54276 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Msh6P54276 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Msh6P54276 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
Msh6P54276 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Msh6P54276 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Msh6P54276 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Msh6P54276 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Msh6P54276 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Msh6P54276 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
Msh6P54276 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Msh6P54276 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Msh6P54276 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Msh6P54276 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
Msh6P54276 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC26.04■■□□□ 1.76
Msh6P54276 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Msh6P54276 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Msh6P54276 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC26.04■■□□□ 1.76
Msh6P54276 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Msh6P54276 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC26.04■■□□□ 1.76
Msh6P54276 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Msh6P54276 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Msh6P54276 Gm42569-201ENSMUST00000200539 472 ntBASIC26.04■■□□□ 1.76
Msh6P54276 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
Msh6P54276 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Msh6P54276 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Msh6P54276 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC26.03■■□□□ 1.76
Msh6P54276 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Msh6P54276 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Msh6P54276 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Msh6P54276 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms