Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lhx4P53776 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lhx4P53776 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lhx4P53776 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Lhx4P53776 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx4P53776 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx4P53776 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.08■□□□□ 0.32
Lhx4P53776 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx4P53776 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.08■□□□□ 0.32
Lhx4P53776 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx4P53776 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx4P53776 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx4P53776 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx4P53776 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx4P53776 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx4P53776 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx4P53776 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Lhx4P53776 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx4P53776 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx4P53776 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx4P53776 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.07■□□□□ 0.32
Lhx4P53776 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.07■□□□□ 0.32
Lhx4P53776 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx4P53776 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.07■□□□□ 0.32
Lhx4P53776 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx4P53776 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx4P53776 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx4P53776 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx4P53776 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx4P53776 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx4P53776 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx4P53776 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx4P53776 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx4P53776 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx4P53776 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx4P53776 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx4P53776 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Lhx4P53776 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx4P53776 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx4P53776 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx4P53776 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Lhx4P53776 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx4P53776 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx4P53776 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx4P53776 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx4P53776 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.04■□□□□ 0.32
Lhx4P53776 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx4P53776 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx4P53776 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx4P53776 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx4P53776 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx4P53776 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx4P53776 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx4P53776 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx4P53776 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx4P53776 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx4P53776 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.04■□□□□ 0.32
Lhx4P53776 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Lhx4P53776 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.03■□□□□ 0.32
Lhx4P53776 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx4P53776 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx4P53776 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx4P53776 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx4P53776 Gm22238-201ENSMUST00000175222 88 ntBASIC17.03■□□□□ 0.32
Lhx4P53776 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx4P53776 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx4P53776 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx4P53776 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx4P53776 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx4P53776 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx4P53776 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lhx4P53776 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lhx4P53776 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lhx4P53776 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Lhx4P53776 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lhx4P53776 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.02■□□□□ 0.32
Lhx4P53776 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.02■□□□□ 0.32
Lhx4P53776 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.02■□□□□ 0.32
Lhx4P53776 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Lhx4P53776 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lhx4P53776 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lhx4P53776 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lhx4P53776 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lhx4P53776 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lhx4P53776 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx4P53776 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx4P53776 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx4P53776 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.01■□□□□ 0.31
Lhx4P53776 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Lhx4P53776 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.01■□□□□ 0.31
Lhx4P53776 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx4P53776 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx4P53776 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx4P53776 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx4P53776 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
Lhx4P53776 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lhx4P53776 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Lhx4P53776 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17■□□□□ 0.31
Lhx4P53776 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lhx4P53776 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 506.2 ms