Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.74■□□□□ 0.91
Lhx3P50481 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.74■□□□□ 0.91
Lhx3P50481 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Lhx3P50481 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lhx3P50481 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lhx3P50481 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lhx3P50481 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lhx3P50481 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.73■□□□□ 0.91
Lhx3P50481 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.73■□□□□ 0.91
Lhx3P50481 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lhx3P50481 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
Lhx3P50481 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lhx3P50481 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lhx3P50481 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lhx3P50481 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lhx3P50481 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lhx3P50481 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lhx3P50481 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Lhx3P50481 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lhx3P50481 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.71■□□□□ 0.91
Lhx3P50481 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Lhx3P50481 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.71■□□□□ 0.91
Lhx3P50481 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Lhx3P50481 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lhx3P50481 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lhx3P50481 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lhx3P50481 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lhx3P50481 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lhx3P50481 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Lhx3P50481 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lhx3P50481 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lhx3P50481 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lhx3P50481 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.7■□□□□ 0.9
Lhx3P50481 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lhx3P50481 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lhx3P50481 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Lhx3P50481 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lhx3P50481 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lhx3P50481 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.69■□□□□ 0.9
Lhx3P50481 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.69■□□□□ 0.9
Lhx3P50481 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.69■□□□□ 0.9
Lhx3P50481 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.69■□□□□ 0.9
Lhx3P50481 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lhx3P50481 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Lhx3P50481 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Lhx3P50481 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Lhx3P50481 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Lhx3P50481 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lhx3P50481 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lhx3P50481 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lhx3P50481 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lhx3P50481 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lhx3P50481 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lhx3P50481 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Lhx3P50481 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lhx3P50481 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lhx3P50481 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Lhx3P50481 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lhx3P50481 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lhx3P50481 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lhx3P50481 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lhx3P50481 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Lhx3P50481 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lhx3P50481 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lhx3P50481 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lhx3P50481 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.65■□□□□ 0.9
Lhx3P50481 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lhx3P50481 Gm27454-201ENSMUST00000185090 204 ntBASIC20.65■□□□□ 0.9
Lhx3P50481 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.65■□□□□ 0.9
Lhx3P50481 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lhx3P50481 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Lhx3P50481 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lhx3P50481 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lhx3P50481 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Lhx3P50481 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lhx3P50481 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lhx3P50481 Gm12821-201ENSMUST00000120022 600 ntBASIC20.64■□□□□ 0.89
Lhx3P50481 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lhx3P50481 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lhx3P50481 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.64■□□□□ 0.89
Lhx3P50481 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lhx3P50481 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lhx3P50481 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lhx3P50481 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Lhx3P50481 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lhx3P50481 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lhx3P50481 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lhx3P50481 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lhx3P50481 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Lhx3P50481 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lhx3P50481 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.63■□□□□ 0.89
Lhx3P50481 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Lhx3P50481 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lhx3P50481 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Lhx3P50481 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lhx3P50481 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.62■□□□□ 0.89
Lhx3P50481 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lhx3P50481 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lhx3P50481 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lhx3P50481 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms