Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.58■□□□□ 0.89
Vps4bP46467 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vps4bP46467 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.58■□□□□ 0.88
Vps4bP46467 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vps4bP46467 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Vps4bP46467 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vps4bP46467 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vps4bP46467 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps4bP46467 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vps4bP46467 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.57■□□□□ 0.88
Vps4bP46467 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.57■□□□□ 0.88
Vps4bP46467 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.57■□□□□ 0.88
Vps4bP46467 Rps24-207ENSMUST00000224568 714 ntBASIC20.57■□□□□ 0.88
Vps4bP46467 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps4bP46467 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Vps4bP46467 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps4bP46467 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps4bP46467 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Vps4bP46467 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Vps4bP46467 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps4bP46467 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps4bP46467 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Vps4bP46467 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.55■□□□□ 0.88
Vps4bP46467 Gm15820-201ENSMUST00000201566 728 ntBASIC20.55■□□□□ 0.88
Vps4bP46467 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.55■□□□□ 0.88
Vps4bP46467 Gm10232-201ENSMUST00000089221 720 ntBASIC20.55■□□□□ 0.88
Vps4bP46467 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Vps4bP46467 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps4bP46467 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Vps4bP46467 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps4bP46467 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Vps4bP46467 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Vps4bP46467 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps4bP46467 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Vps4bP46467 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Vps4bP46467 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps4bP46467 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps4bP46467 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps4bP46467 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps4bP46467 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Vps4bP46467 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.53■□□□□ 0.88
Vps4bP46467 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps4bP46467 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps4bP46467 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vps4bP46467 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps4bP46467 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vps4bP46467 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps4bP46467 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps4bP46467 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps4bP46467 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps4bP46467 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.52■□□□□ 0.88
Vps4bP46467 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vps4bP46467 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.52■□□□□ 0.88
Vps4bP46467 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.52■□□□□ 0.87
Vps4bP46467 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps4bP46467 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps4bP46467 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps4bP46467 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Vps4bP46467 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Vps4bP46467 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps4bP46467 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.51■□□□□ 0.87
Vps4bP46467 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps4bP46467 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vps4bP46467 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps4bP46467 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps4bP46467 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps4bP46467 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.5■□□□□ 0.87
Vps4bP46467 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps4bP46467 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps4bP46467 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Vps4bP46467 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps4bP46467 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps4bP46467 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps4bP46467 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps4bP46467 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps4bP46467 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.5■□□□□ 0.87
Vps4bP46467 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps4bP46467 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps4bP46467 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps4bP46467 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Vps4bP46467 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps4bP46467 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps4bP46467 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps4bP46467 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Vps4bP46467 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.49■□□□□ 0.87
Vps4bP46467 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps4bP46467 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.49■□□□□ 0.87
Vps4bP46467 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps4bP46467 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps4bP46467 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps4bP46467 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps4bP46467 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Vps4bP46467 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps4bP46467 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps4bP46467 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps4bP46467 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps4bP46467 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
Vps4bP46467 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps4bP46467 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.47■□□□□ 0.87
Vps4bP46467 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms