Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hist1h1aP43275 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hist1h1aP43275 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.67■□□□□ 0.26
Hist1h1aP43275 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.67■□□□□ 0.26
Hist1h1aP43275 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hist1h1aP43275 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hist1h1aP43275 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hist1h1aP43275 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hist1h1aP43275 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Hist1h1aP43275 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.67■□□□□ 0.26
Hist1h1aP43275 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Hist1h1aP43275 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hist1h1aP43275 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hist1h1aP43275 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hist1h1aP43275 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.66■□□□□ 0.26
Hist1h1aP43275 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Hist1h1aP43275 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hist1h1aP43275 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.66■□□□□ 0.26
Hist1h1aP43275 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hist1h1aP43275 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hist1h1aP43275 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.66■□□□□ 0.26
Hist1h1aP43275 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hist1h1aP43275 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hist1h1aP43275 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Hist1h1aP43275 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Hist1h1aP43275 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Hist1h1aP43275 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hist1h1aP43275 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Hist1h1aP43275 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hist1h1aP43275 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hist1h1aP43275 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hist1h1aP43275 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hist1h1aP43275 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hist1h1aP43275 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hist1h1aP43275 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hist1h1aP43275 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hist1h1aP43275 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hist1h1aP43275 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hist1h1aP43275 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hist1h1aP43275 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hist1h1aP43275 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.64■□□□□ 0.25
Hist1h1aP43275 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Hist1h1aP43275 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hist1h1aP43275 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.64■□□□□ 0.25
Hist1h1aP43275 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hist1h1aP43275 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Hist1h1aP43275 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hist1h1aP43275 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Hist1h1aP43275 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hist1h1aP43275 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hist1h1aP43275 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hist1h1aP43275 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hist1h1aP43275 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hist1h1aP43275 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hist1h1aP43275 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hist1h1aP43275 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hist1h1aP43275 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hist1h1aP43275 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hist1h1aP43275 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Hist1h1aP43275 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hist1h1aP43275 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hist1h1aP43275 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hist1h1aP43275 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.63■□□□□ 0.25
Hist1h1aP43275 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hist1h1aP43275 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hist1h1aP43275 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hist1h1aP43275 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.62■□□□□ 0.25
Hist1h1aP43275 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hist1h1aP43275 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hist1h1aP43275 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hist1h1aP43275 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hist1h1aP43275 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hist1h1aP43275 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hist1h1aP43275 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hist1h1aP43275 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hist1h1aP43275 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hist1h1aP43275 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hist1h1aP43275 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hist1h1aP43275 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Hist1h1aP43275 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hist1h1aP43275 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hist1h1aP43275 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
Hist1h1aP43275 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hist1h1aP43275 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hist1h1aP43275 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hist1h1aP43275 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hist1h1aP43275 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.61■□□□□ 0.25
Hist1h1aP43275 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hist1h1aP43275 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hist1h1aP43275 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hist1h1aP43275 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hist1h1aP43275 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.6■□□□□ 0.25
Hist1h1aP43275 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hist1h1aP43275 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Hist1h1aP43275 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hist1h1aP43275 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hist1h1aP43275 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hist1h1aP43275 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hist1h1aP43275 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hist1h1aP43275 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms