Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfsf9P41274 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Tnfsf9P41274 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.46■□□□□ 0.71
Tnfsf9P41274 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.46■□□□□ 0.71
Tnfsf9P41274 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.46■□□□□ 0.71
Tnfsf9P41274 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.46■□□□□ 0.71
Tnfsf9P41274 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.46■□□□□ 0.71
Tnfsf9P41274 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfsf9P41274 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Tnfsf9P41274 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.45■□□□□ 0.7
Tnfsf9P41274 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfsf9P41274 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Tnfsf9P41274 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.44■□□□□ 0.7
Tnfsf9P41274 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfsf9P41274 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfsf9P41274 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfsf9P41274 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Tnfsf9P41274 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.44■□□□□ 0.7
Tnfsf9P41274 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfsf9P41274 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfsf9P41274 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfsf9P41274 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.43■□□□□ 0.7
Tnfsf9P41274 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfsf9P41274 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfsf9P41274 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Tnfsf9P41274 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfsf9P41274 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Tnfsf9P41274 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Tnfsf9P41274 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfsf9P41274 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfsf9P41274 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfsf9P41274 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfsf9P41274 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.43■□□□□ 0.7
Tnfsf9P41274 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfsf9P41274 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Tnfsf9P41274 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Tnfsf9P41274 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.42■□□□□ 0.7
Tnfsf9P41274 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.42■□□□□ 0.7
Tnfsf9P41274 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.42■□□□□ 0.7
Tnfsf9P41274 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfsf9P41274 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfsf9P41274 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfsf9P41274 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfsf9P41274 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfsf9P41274 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.41■□□□□ 0.7
Tnfsf9P41274 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Tnfsf9P41274 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.41■□□□□ 0.7
Tnfsf9P41274 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.41■□□□□ 0.7
Tnfsf9P41274 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfsf9P41274 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.41■□□□□ 0.7
Tnfsf9P41274 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Tnfsf9P41274 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfsf9P41274 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfsf9P41274 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfsf9P41274 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfsf9P41274 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfsf9P41274 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfsf9P41274 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.4■□□□□ 0.7
Tnfsf9P41274 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfsf9P41274 Mir7075-201ENSMUST00000184187 82 ntBASIC19.4■□□□□ 0.7
Tnfsf9P41274 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfsf9P41274 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Tnfsf9P41274 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfsf9P41274 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfsf9P41274 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfsf9P41274 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Tnfsf9P41274 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfsf9P41274 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Tnfsf9P41274 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.39■□□□□ 0.69
Tnfsf9P41274 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Tnfsf9P41274 Serp2-204ENSMUST00000228055 705 ntBASIC19.39■□□□□ 0.69
Tnfsf9P41274 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Tnfsf9P41274 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfsf9P41274 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfsf9P41274 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfsf9P41274 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfsf9P41274 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfsf9P41274 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfsf9P41274 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf9P41274 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf9P41274 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf9P41274 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf9P41274 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf9P41274 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.37■□□□□ 0.69
Tnfsf9P41274 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Tnfsf9P41274 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf9P41274 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Tnfsf9P41274 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf9P41274 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Tnfsf9P41274 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Tnfsf9P41274 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Tnfsf9P41274 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfsf9P41274 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfsf9P41274 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfsf9P41274 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfsf9P41274 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Tnfsf9P41274 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.36■□□□□ 0.69
Tnfsf9P41274 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfsf9P41274 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfsf9P41274 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms