Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RxrbP28704 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
RxrbP28704 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.45■□□□□ 0.86
RxrbP28704 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RxrbP28704 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RxrbP28704 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.45■□□□□ 0.86
RxrbP28704 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RxrbP28704 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RxrbP28704 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RxrbP28704 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RxrbP28704 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.45■□□□□ 0.86
RxrbP28704 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RxrbP28704 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.44■□□□□ 0.86
RxrbP28704 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.44■□□□□ 0.86
RxrbP28704 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RxrbP28704 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RxrbP28704 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RxrbP28704 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RxrbP28704 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RxrbP28704 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RxrbP28704 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RxrbP28704 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RxrbP28704 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RxrbP28704 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RxrbP28704 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RxrbP28704 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RxrbP28704 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RxrbP28704 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RxrbP28704 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RxrbP28704 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.42■□□□□ 0.86
RxrbP28704 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RxrbP28704 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RxrbP28704 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.42■□□□□ 0.86
RxrbP28704 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RxrbP28704 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RxrbP28704 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RxrbP28704 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RxrbP28704 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RxrbP28704 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.41■□□□□ 0.86
RxrbP28704 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RxrbP28704 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RxrbP28704 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.41■□□□□ 0.86
RxrbP28704 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RxrbP28704 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RxrbP28704 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.4■□□□□ 0.86
RxrbP28704 Gm12366-201ENSMUST00000121722 873 ntBASIC20.4■□□□□ 0.86
RxrbP28704 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RxrbP28704 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.4■□□□□ 0.86
RxrbP28704 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RxrbP28704 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RxrbP28704 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RxrbP28704 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.4■□□□□ 0.86
RxrbP28704 Gm5786-201ENSMUST00000085368 882 ntBASIC20.4■□□□□ 0.86
RxrbP28704 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RxrbP28704 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RxrbP28704 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RxrbP28704 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RxrbP28704 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.39■□□□□ 0.86
RxrbP28704 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RxrbP28704 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RxrbP28704 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RxrbP28704 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
RxrbP28704 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RxrbP28704 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.39■□□□□ 0.85
RxrbP28704 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RxrbP28704 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
RxrbP28704 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.38■□□□□ 0.85
RxrbP28704 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RxrbP28704 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RxrbP28704 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RxrbP28704 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RxrbP28704 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RxrbP28704 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RxrbP28704 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RxrbP28704 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RxrbP28704 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.37■□□□□ 0.85
RxrbP28704 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RxrbP28704 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RxrbP28704 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RxrbP28704 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RxrbP28704 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RxrbP28704 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RxrbP28704 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RxrbP28704 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RxrbP28704 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RxrbP28704 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RxrbP28704 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RxrbP28704 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RxrbP28704 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RxrbP28704 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RxrbP28704 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RxrbP28704 Gm10420-201ENSMUST00000121713 882 ntBASIC20.36■□□□□ 0.85
RxrbP28704 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.36■□□□□ 0.85
RxrbP28704 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RxrbP28704 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.36■□□□□ 0.85
RxrbP28704 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RxrbP28704 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.35■□□□□ 0.85
RxrbP28704 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RxrbP28704 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.35■□□□□ 0.85
RxrbP28704 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms