Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nckap1P28660 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nckap1P28660 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nckap1P28660 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nckap1P28660 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nckap1P28660 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nckap1P28660 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nckap1P28660 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nckap1P28660 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nckap1P28660 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.23■□□□□ 0.83
Nckap1P28660 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nckap1P28660 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nckap1P28660 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nckap1P28660 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nckap1P28660 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nckap1P28660 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nckap1P28660 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nckap1P28660 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.22■□□□□ 0.83
Nckap1P28660 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nckap1P28660 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Nckap1P28660 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nckap1P28660 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nckap1P28660 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.22■□□□□ 0.83
Nckap1P28660 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nckap1P28660 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nckap1P28660 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nckap1P28660 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Nckap1P28660 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nckap1P28660 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nckap1P28660 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nckap1P28660 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nckap1P28660 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nckap1P28660 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.21■□□□□ 0.83
Nckap1P28660 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nckap1P28660 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nckap1P28660 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.21■□□□□ 0.83
Nckap1P28660 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nckap1P28660 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nckap1P28660 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Nckap1P28660 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Nckap1P28660 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nckap1P28660 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nckap1P28660 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nckap1P28660 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Nckap1P28660 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Nckap1P28660 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.2■□□□□ 0.82
Nckap1P28660 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.2■□□□□ 0.82
Nckap1P28660 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
Nckap1P28660 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nckap1P28660 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nckap1P28660 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Nckap1P28660 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.2■□□□□ 0.82
Nckap1P28660 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.19■□□□□ 0.82
Nckap1P28660 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nckap1P28660 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Nckap1P28660 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Nckap1P28660 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nckap1P28660 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Nckap1P28660 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nckap1P28660 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nckap1P28660 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nckap1P28660 Gm18284-201ENSMUST00000172604 624 ntBASIC20.19■□□□□ 0.82
Nckap1P28660 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nckap1P28660 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nckap1P28660 Gm8495-201ENSMUST00000188740 694 ntBASIC20.19■□□□□ 0.82
Nckap1P28660 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
Nckap1P28660 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nckap1P28660 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Nckap1P28660 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nckap1P28660 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nckap1P28660 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nckap1P28660 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nckap1P28660 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nckap1P28660 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nckap1P28660 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Nckap1P28660 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.18■□□□□ 0.82
Nckap1P28660 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nckap1P28660 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nckap1P28660 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nckap1P28660 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nckap1P28660 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nckap1P28660 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Nckap1P28660 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nckap1P28660 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Nckap1P28660 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.17■□□□□ 0.82
Nckap1P28660 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nckap1P28660 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.17■□□□□ 0.82
Nckap1P28660 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nckap1P28660 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.17■□□□□ 0.82
Nckap1P28660 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nckap1P28660 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Nckap1P28660 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nckap1P28660 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nckap1P28660 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.16■□□□□ 0.82
Nckap1P28660 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nckap1P28660 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Nckap1P28660 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nckap1P28660 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nckap1P28660 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nckap1P28660 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms