Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Rpl3P27659 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Rpl3P27659 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.3■□□□□ 0.68
Rpl3P27659 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpl3P27659 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpl3P27659 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpl3P27659 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.29■□□□□ 0.68
Rpl3P27659 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpl3P27659 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Rpl3P27659 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpl3P27659 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpl3P27659 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rpl3P27659 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpl3P27659 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpl3P27659 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rpl3P27659 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rpl3P27659 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpl3P27659 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpl3P27659 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.28■□□□□ 0.68
Rpl3P27659 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rpl3P27659 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpl3P27659 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rpl3P27659 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.28■□□□□ 0.68
Rpl3P27659 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpl3P27659 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rpl3P27659 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Rpl3P27659 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.28■□□□□ 0.68
Rpl3P27659 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpl3P27659 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpl3P27659 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpl3P27659 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpl3P27659 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpl3P27659 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpl3P27659 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Rpl3P27659 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpl3P27659 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rpl3P27659 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpl3P27659 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpl3P27659 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpl3P27659 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.26■□□□□ 0.67
Rpl3P27659 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl3P27659 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rpl3P27659 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl3P27659 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl3P27659 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl3P27659 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl3P27659 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl3P27659 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rpl3P27659 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.25■□□□□ 0.67
Rpl3P27659 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.25■□□□□ 0.67
Rpl3P27659 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl3P27659 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rpl3P27659 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rpl3P27659 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.24■□□□□ 0.67
Rpl3P27659 Gm40881-201ENSMUST00000223397 166 ntBASIC19.24■□□□□ 0.67
Rpl3P27659 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rpl3P27659 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Rpl3P27659 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpl3P27659 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.24■□□□□ 0.67
Rpl3P27659 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rpl3P27659 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpl3P27659 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpl3P27659 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.23■□□□□ 0.67
Rpl3P27659 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.23■□□□□ 0.67
Rpl3P27659 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.23■□□□□ 0.67
Rpl3P27659 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpl3P27659 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Rpl3P27659 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpl3P27659 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.23■□□□□ 0.67
Rpl3P27659 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpl3P27659 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpl3P27659 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpl3P27659 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rpl3P27659 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpl3P27659 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpl3P27659 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rpl3P27659 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rpl3P27659 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.22■□□□□ 0.67
Rpl3P27659 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpl3P27659 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpl3P27659 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpl3P27659 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpl3P27659 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rpl3P27659 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rpl3P27659 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rpl3P27659 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Rpl3P27659 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rpl3P27659 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.21■□□□□ 0.67
Rpl3P27659 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpl3P27659 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rpl3P27659 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpl3P27659 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpl3P27659 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpl3P27659 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.2■□□□□ 0.66
Rpl3P27659 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rpl3P27659 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.2■□□□□ 0.66
Rpl3P27659 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rpl3P27659 Gm7143-201ENSMUST00000222811 859 ntBASIC19.2■□□□□ 0.66
Rpl3P27659 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpl3P27659 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms