Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col8a2P25318 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Col8a2P25318 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col8a2P25318 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col8a2P25318 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.02■□□□□ 0.32
Col8a2P25318 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col8a2P25318 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col8a2P25318 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col8a2P25318 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col8a2P25318 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col8a2P25318 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col8a2P25318 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col8a2P25318 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col8a2P25318 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col8a2P25318 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col8a2P25318 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Col8a2P25318 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.01■□□□□ 0.31
Col8a2P25318 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col8a2P25318 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Col8a2P25318 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col8a2P25318 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col8a2P25318 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col8a2P25318 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Col8a2P25318 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Col8a2P25318 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col8a2P25318 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17■□□□□ 0.31
Col8a2P25318 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Col8a2P25318 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col8a2P25318 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col8a2P25318 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col8a2P25318 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.99■□□□□ 0.31
Col8a2P25318 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col8a2P25318 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col8a2P25318 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col8a2P25318 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col8a2P25318 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col8a2P25318 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col8a2P25318 Gm43137-201ENSMUST00000198052 594 ntBASIC16.99■□□□□ 0.31
Col8a2P25318 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.99■□□□□ 0.31
Col8a2P25318 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col8a2P25318 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col8a2P25318 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.99■□□□□ 0.31
Col8a2P25318 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col8a2P25318 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Col8a2P25318 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col8a2P25318 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col8a2P25318 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col8a2P25318 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col8a2P25318 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col8a2P25318 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
Col8a2P25318 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col8a2P25318 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col8a2P25318 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col8a2P25318 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col8a2P25318 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col8a2P25318 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Col8a2P25318 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col8a2P25318 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col8a2P25318 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col8a2P25318 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Col8a2P25318 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col8a2P25318 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.97■□□□□ 0.31
Col8a2P25318 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col8a2P25318 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col8a2P25318 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col8a2P25318 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.96■□□□□ 0.31
Col8a2P25318 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col8a2P25318 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col8a2P25318 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.96■□□□□ 0.3
Col8a2P25318 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col8a2P25318 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.95■□□□□ 0.3
Col8a2P25318 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col8a2P25318 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col8a2P25318 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.95■□□□□ 0.3
Col8a2P25318 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col8a2P25318 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Col8a2P25318 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Col8a2P25318 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col8a2P25318 Gm12821-201ENSMUST00000120022 600 ntBASIC16.95■□□□□ 0.3
Col8a2P25318 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.95■□□□□ 0.3
Col8a2P25318 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col8a2P25318 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col8a2P25318 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col8a2P25318 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.95■□□□□ 0.3
Col8a2P25318 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col8a2P25318 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Col8a2P25318 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Col8a2P25318 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Col8a2P25318 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col8a2P25318 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col8a2P25318 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col8a2P25318 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col8a2P25318 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col8a2P25318 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Col8a2P25318 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col8a2P25318 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col8a2P25318 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col8a2P25318 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Col8a2P25318 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col8a2P25318 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms