Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pde6bP23440 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
Pde6bP23440 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC22.09■■□□□ 1.13
Pde6bP23440 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Pde6bP23440 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC22.09■■□□□ 1.13
Pde6bP23440 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pde6bP23440 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Pde6bP23440 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Pde6bP23440 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pde6bP23440 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Pde6bP23440 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pde6bP23440 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Pde6bP23440 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pde6bP23440 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Pde6bP23440 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Pde6bP23440 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pde6bP23440 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pde6bP23440 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pde6bP23440 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pde6bP23440 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Pde6bP23440 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pde6bP23440 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC22.07■■□□□ 1.12
Pde6bP23440 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pde6bP23440 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pde6bP23440 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Pde6bP23440 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pde6bP23440 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pde6bP23440 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.06■■□□□ 1.12
Pde6bP23440 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pde6bP23440 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Pde6bP23440 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Pde6bP23440 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pde6bP23440 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pde6bP23440 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pde6bP23440 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Pde6bP23440 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC22.05■■□□□ 1.12
Pde6bP23440 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pde6bP23440 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Pde6bP23440 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pde6bP23440 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pde6bP23440 AC166356.1-201ENSMUST00000228236 1426 ntBASIC22.05■■□□□ 1.12
Pde6bP23440 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pde6bP23440 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pde6bP23440 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pde6bP23440 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pde6bP23440 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pde6bP23440 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pde6bP23440 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC22.04■■□□□ 1.12
Pde6bP23440 Gm43530-201ENSMUST00000195920 274 ntBASIC22.04■■□□□ 1.12
Pde6bP23440 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pde6bP23440 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pde6bP23440 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pde6bP23440 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pde6bP23440 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pde6bP23440 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pde6bP23440 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Pde6bP23440 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC22.03■■□□□ 1.12
Pde6bP23440 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pde6bP23440 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pde6bP23440 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pde6bP23440 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.03■■□□□ 1.12
Pde6bP23440 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.02■■□□□ 1.12
Pde6bP23440 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pde6bP23440 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pde6bP23440 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pde6bP23440 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC22.02■■□□□ 1.12
Pde6bP23440 Gm43173-201ENSMUST00000202246 593 ntBASIC22.02■■□□□ 1.12
Pde6bP23440 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC22.02■■□□□ 1.12
Pde6bP23440 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Pde6bP23440 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pde6bP23440 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pde6bP23440 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pde6bP23440 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pde6bP23440 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pde6bP23440 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pde6bP23440 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.01■■□□□ 1.11
Pde6bP23440 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pde6bP23440 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pde6bP23440 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.01■■□□□ 1.11
Pde6bP23440 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pde6bP23440 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pde6bP23440 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Pde6bP23440 Gm7160-202ENSMUST00000188519 1027 ntBASIC22.01■■□□□ 1.11
Pde6bP23440 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pde6bP23440 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pde6bP23440 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pde6bP23440 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pde6bP23440 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pde6bP23440 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pde6bP23440 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pde6bP23440 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pde6bP23440 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.99■■□□□ 1.11
Pde6bP23440 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pde6bP23440 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pde6bP23440 Gm12251-201ENSMUST00000117893 792 ntBASIC21.98■■□□□ 1.11
Pde6bP23440 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pde6bP23440 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pde6bP23440 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.98■■□□□ 1.11
Pde6bP23440 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.98■■□□□ 1.11
Pde6bP23440 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms