Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd48P18181 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd48P18181 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd48P18181 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.16■□□□□ 0.5
Cd48P18181 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd48P18181 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd48P18181 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Cd48P18181 Gm5921-201ENSMUST00000075898 882 ntBASIC18.16■□□□□ 0.5
Cd48P18181 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cd48P18181 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cd48P18181 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd48P18181 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cd48P18181 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd48P18181 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cd48P18181 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd48P18181 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.15■□□□□ 0.5
Cd48P18181 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd48P18181 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd48P18181 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd48P18181 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.15■□□□□ 0.5
Cd48P18181 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cd48P18181 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd48P18181 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd48P18181 Gm43566-201ENSMUST00000196851 808 ntBASIC18.14■□□□□ 0.49
Cd48P18181 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd48P18181 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cd48P18181 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd48P18181 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.13■□□□□ 0.49
Cd48P18181 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cd48P18181 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Cd48P18181 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cd48P18181 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cd48P18181 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd48P18181 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd48P18181 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.13■□□□□ 0.49
Cd48P18181 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd48P18181 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd48P18181 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.13■□□□□ 0.49
Cd48P18181 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd48P18181 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cd48P18181 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cd48P18181 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd48P18181 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd48P18181 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd48P18181 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Cd48P18181 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.12■□□□□ 0.49
Cd48P18181 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cd48P18181 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cd48P18181 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cd48P18181 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Cd48P18181 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd48P18181 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd48P18181 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd48P18181 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.12■□□□□ 0.49
Cd48P18181 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cd48P18181 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd48P18181 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd48P18181 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd48P18181 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.11■□□□□ 0.49
Cd48P18181 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.11■□□□□ 0.49
Cd48P18181 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd48P18181 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd48P18181 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd48P18181 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cd48P18181 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cd48P18181 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cd48P18181 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cd48P18181 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cd48P18181 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cd48P18181 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.1■□□□□ 0.49
Cd48P18181 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cd48P18181 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cd48P18181 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cd48P18181 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cd48P18181 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cd48P18181 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cd48P18181 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cd48P18181 Golph3-202ENSMUST00000226517 2359 ntBASIC18.09■□□□□ 0.49
Cd48P18181 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd48P18181 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cd48P18181 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd48P18181 Gm10399-202ENSMUST00000202768 748 ntBASIC18.09■□□□□ 0.49
Cd48P18181 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd48P18181 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd48P18181 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cd48P18181 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd48P18181 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd48P18181 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cd48P18181 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Cd48P18181 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cd48P18181 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cd48P18181 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cd48P18181 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.08■□□□□ 0.48
Cd48P18181 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cd48P18181 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cd48P18181 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cd48P18181 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd48P18181 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cd48P18181 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.07■□□□□ 0.48
Cd48P18181 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms