Protein–RNA interactions for Protein: P17533

Defa-rs1, Alpha-defensin-related sequence 1, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defa-rs1P17533 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Defa-rs1P17533 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Defa-rs1P17533 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Defa-rs1P17533 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Defa-rs1P17533 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Defa-rs1P17533 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.39■□□□□ 0.53
Defa-rs1P17533 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Defa-rs1P17533 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.39■□□□□ 0.53
Defa-rs1P17533 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.39■□□□□ 0.53
Defa-rs1P17533 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.39■□□□□ 0.53
Defa-rs1P17533 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Defa-rs1P17533 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Defa-rs1P17533 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Defa-rs1P17533 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Defa-rs1P17533 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Defa-rs1P17533 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.38■□□□□ 0.53
Defa-rs1P17533 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Defa-rs1P17533 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Defa-rs1P17533 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Defa-rs1P17533 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Defa-rs1P17533 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Defa-rs1P17533 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Defa-rs1P17533 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Defa-rs1P17533 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.37■□□□□ 0.53
Defa-rs1P17533 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Defa-rs1P17533 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Defa-rs1P17533 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.37■□□□□ 0.53
Defa-rs1P17533 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Defa-rs1P17533 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.37■□□□□ 0.53
Defa-rs1P17533 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Defa-rs1P17533 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Defa-rs1P17533 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Defa-rs1P17533 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Defa-rs1P17533 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Defa-rs1P17533 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Defa-rs1P17533 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Defa-rs1P17533 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Defa-rs1P17533 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Defa-rs1P17533 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Defa-rs1P17533 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Defa-rs1P17533 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Defa-rs1P17533 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Defa-rs1P17533 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Defa-rs1P17533 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Defa-rs1P17533 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.34■□□□□ 0.53
Defa-rs1P17533 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.34■□□□□ 0.53
Defa-rs1P17533 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Defa-rs1P17533 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Defa-rs1P17533 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
Defa-rs1P17533 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Defa-rs1P17533 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Defa-rs1P17533 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Defa-rs1P17533 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Defa-rs1P17533 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.33■□□□□ 0.53
Defa-rs1P17533 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.33■□□□□ 0.53
Defa-rs1P17533 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Defa-rs1P17533 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Defa-rs1P17533 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Defa-rs1P17533 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Defa-rs1P17533 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.33■□□□□ 0.52
Defa-rs1P17533 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Defa-rs1P17533 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.33■□□□□ 0.52
Defa-rs1P17533 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Defa-rs1P17533 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Defa-rs1P17533 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Defa-rs1P17533 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Defa-rs1P17533 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.32■□□□□ 0.52
Defa-rs1P17533 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Defa-rs1P17533 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.31■□□□□ 0.52
Defa-rs1P17533 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Defa-rs1P17533 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Defa-rs1P17533 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
Defa-rs1P17533 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.31■□□□□ 0.52
Defa-rs1P17533 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Defa-rs1P17533 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.31■□□□□ 0.52
Defa-rs1P17533 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Defa-rs1P17533 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Defa-rs1P17533 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Defa-rs1P17533 Gm9988-201ENSMUST00000069786 435 ntBASIC18.31■□□□□ 0.52
Defa-rs1P17533 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Defa-rs1P17533 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.31■□□□□ 0.52
Defa-rs1P17533 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Defa-rs1P17533 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Defa-rs1P17533 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Defa-rs1P17533 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Defa-rs1P17533 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Defa-rs1P17533 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Defa-rs1P17533 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Defa-rs1P17533 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Defa-rs1P17533 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.3■□□□□ 0.52
Defa-rs1P17533 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Defa-rs1P17533 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Defa-rs1P17533 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Defa-rs1P17533 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Defa-rs1P17533 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Defa-rs1P17533 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Defa-rs1P17533 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Defa-rs1P17533 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.29■□□□□ 0.52
Defa-rs1P17533 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Defa-rs1P17533 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms