Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.39■□□□□ 0.53
TpbpaP13438 Gm10420-201ENSMUST00000121713 882 ntBASIC18.39■□□□□ 0.53
TpbpaP13438 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.39■□□□□ 0.53
TpbpaP13438 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.39■□□□□ 0.53
TpbpaP13438 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.39■□□□□ 0.53
TpbpaP13438 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TpbpaP13438 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TpbpaP13438 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TpbpaP13438 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TpbpaP13438 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TpbpaP13438 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TpbpaP13438 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TpbpaP13438 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TpbpaP13438 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TpbpaP13438 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TpbpaP13438 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TpbpaP13438 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TpbpaP13438 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TpbpaP13438 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TpbpaP13438 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TpbpaP13438 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TpbpaP13438 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TpbpaP13438 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TpbpaP13438 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TpbpaP13438 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TpbpaP13438 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TpbpaP13438 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TpbpaP13438 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TpbpaP13438 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TpbpaP13438 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TpbpaP13438 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TpbpaP13438 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TpbpaP13438 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TpbpaP13438 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TpbpaP13438 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.36■□□□□ 0.53
TpbpaP13438 Gm12366-201ENSMUST00000121722 873 ntBASIC18.36■□□□□ 0.53
TpbpaP13438 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.36■□□□□ 0.53
TpbpaP13438 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TpbpaP13438 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
TpbpaP13438 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TpbpaP13438 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TpbpaP13438 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TpbpaP13438 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TpbpaP13438 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.36■□□□□ 0.53
TpbpaP13438 Gm5786-201ENSMUST00000085368 882 ntBASIC18.36■□□□□ 0.53
TpbpaP13438 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TpbpaP13438 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TpbpaP13438 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TpbpaP13438 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TpbpaP13438 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TpbpaP13438 Mir6538-201ENSMUST00000183713 110 ntBASIC18.35■□□□□ 0.53
TpbpaP13438 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TpbpaP13438 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TpbpaP13438 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TpbpaP13438 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TpbpaP13438 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.35■□□□□ 0.53
TpbpaP13438 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TpbpaP13438 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TpbpaP13438 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TpbpaP13438 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TpbpaP13438 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.34■□□□□ 0.53
TpbpaP13438 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
TpbpaP13438 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TpbpaP13438 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TpbpaP13438 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TpbpaP13438 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TpbpaP13438 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TpbpaP13438 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TpbpaP13438 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TpbpaP13438 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TpbpaP13438 Notumos-201ENSMUST00000151998 2659 ntBASIC18.33■□□□□ 0.53
TpbpaP13438 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TpbpaP13438 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TpbpaP13438 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TpbpaP13438 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TpbpaP13438 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TpbpaP13438 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TpbpaP13438 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TpbpaP13438 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TpbpaP13438 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
TpbpaP13438 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TpbpaP13438 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TpbpaP13438 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TpbpaP13438 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TpbpaP13438 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
TpbpaP13438 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TpbpaP13438 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TpbpaP13438 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.32■□□□□ 0.52
TpbpaP13438 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TpbpaP13438 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TpbpaP13438 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TpbpaP13438 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TpbpaP13438 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TpbpaP13438 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TpbpaP13438 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TpbpaP13438 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TpbpaP13438 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TpbpaP13438 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TpbpaP13438 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TpbpaP13438 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms