Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxa4P06798 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxa4P06798 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxa4P06798 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxa4P06798 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxa4P06798 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxa4P06798 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxa4P06798 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxa4P06798 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.09■□□□□ 0.81
Hoxa4P06798 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Hoxa4P06798 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxa4P06798 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxa4P06798 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxa4P06798 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxa4P06798 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxa4P06798 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxa4P06798 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxa4P06798 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.08■□□□□ 0.81
Hoxa4P06798 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hoxa4P06798 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hoxa4P06798 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.08■□□□□ 0.8
Hoxa4P06798 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Hoxa4P06798 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxa4P06798 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxa4P06798 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxa4P06798 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Hoxa4P06798 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Hoxa4P06798 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxa4P06798 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxa4P06798 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxa4P06798 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.07■□□□□ 0.8
Hoxa4P06798 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.07■□□□□ 0.8
Hoxa4P06798 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.07■□□□□ 0.8
Hoxa4P06798 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxa4P06798 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxa4P06798 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Hoxa4P06798 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxa4P06798 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxa4P06798 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Hoxa4P06798 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Hoxa4P06798 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.06■□□□□ 0.8
Hoxa4P06798 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxa4P06798 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxa4P06798 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxa4P06798 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.06■□□□□ 0.8
Hoxa4P06798 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.05■□□□□ 0.8
Hoxa4P06798 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
Hoxa4P06798 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxa4P06798 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.05■□□□□ 0.8
Hoxa4P06798 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxa4P06798 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.05■□□□□ 0.8
Hoxa4P06798 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxa4P06798 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.05■□□□□ 0.8
Hoxa4P06798 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxa4P06798 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Hoxa4P06798 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxa4P06798 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Hoxa4P06798 Gm12821-201ENSMUST00000120022 600 ntBASIC20.04■□□□□ 0.8
Hoxa4P06798 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxa4P06798 Mir6236-201ENSMUST00000184437 123 ntBASIC20.04■□□□□ 0.8
Hoxa4P06798 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.04■□□□□ 0.8
Hoxa4P06798 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxa4P06798 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Hoxa4P06798 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxa4P06798 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Hoxa4P06798 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxa4P06798 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxa4P06798 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxa4P06798 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxa4P06798 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxa4P06798 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxa4P06798 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxa4P06798 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxa4P06798 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxa4P06798 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxa4P06798 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxa4P06798 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Hoxa4P06798 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hoxa4P06798 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxa4P06798 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxa4P06798 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxa4P06798 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxa4P06798 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxa4P06798 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxa4P06798 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxa4P06798 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxa4P06798 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.01■□□□□ 0.79
Hoxa4P06798 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxa4P06798 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.01■□□□□ 0.79
Hoxa4P06798 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
Hoxa4P06798 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.01■□□□□ 0.79
Hoxa4P06798 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Hoxa4P06798 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Hoxa4P06798 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxa4P06798 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Hoxa4P06798 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxa4P06798 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxa4P06798 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxa4P06798 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxa4P06798 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms