Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PdgfrbP05622 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PdgfrbP05622 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.55■□□□□ 0.88
PdgfrbP05622 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PdgfrbP05622 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PdgfrbP05622 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PdgfrbP05622 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PdgfrbP05622 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PdgfrbP05622 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PdgfrbP05622 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PdgfrbP05622 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PdgfrbP05622 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PdgfrbP05622 Gm7143-201ENSMUST00000222811 859 ntBASIC20.53■□□□□ 0.88
PdgfrbP05622 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PdgfrbP05622 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PdgfrbP05622 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PdgfrbP05622 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PdgfrbP05622 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PdgfrbP05622 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PdgfrbP05622 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PdgfrbP05622 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PdgfrbP05622 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PdgfrbP05622 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PdgfrbP05622 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.52■□□□□ 0.88
PdgfrbP05622 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.52■□□□□ 0.88
PdgfrbP05622 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.52■□□□□ 0.88
PdgfrbP05622 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PdgfrbP05622 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
PdgfrbP05622 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PdgfrbP05622 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PdgfrbP05622 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PdgfrbP05622 Gm22238-201ENSMUST00000175222 88 ntBASIC20.51■□□□□ 0.87
PdgfrbP05622 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PdgfrbP05622 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PdgfrbP05622 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PdgfrbP05622 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PdgfrbP05622 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PdgfrbP05622 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PdgfrbP05622 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PdgfrbP05622 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PdgfrbP05622 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PdgfrbP05622 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PdgfrbP05622 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PdgfrbP05622 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.5■□□□□ 0.87
PdgfrbP05622 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PdgfrbP05622 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PdgfrbP05622 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PdgfrbP05622 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PdgfrbP05622 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
PdgfrbP05622 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.49■□□□□ 0.87
PdgfrbP05622 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PdgfrbP05622 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PdgfrbP05622 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.49■□□□□ 0.87
PdgfrbP05622 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.49■□□□□ 0.87
PdgfrbP05622 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.49■□□□□ 0.87
PdgfrbP05622 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PdgfrbP05622 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.49■□□□□ 0.87
PdgfrbP05622 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PdgfrbP05622 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.49■□□□□ 0.87
PdgfrbP05622 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PdgfrbP05622 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PdgfrbP05622 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PdgfrbP05622 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PdgfrbP05622 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PdgfrbP05622 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PdgfrbP05622 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PdgfrbP05622 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PdgfrbP05622 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PdgfrbP05622 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PdgfrbP05622 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PdgfrbP05622 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PdgfrbP05622 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.47■□□□□ 0.87
PdgfrbP05622 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.47■□□□□ 0.87
PdgfrbP05622 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PdgfrbP05622 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PdgfrbP05622 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PdgfrbP05622 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PdgfrbP05622 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PdgfrbP05622 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PdgfrbP05622 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PdgfrbP05622 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PdgfrbP05622 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PdgfrbP05622 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PdgfrbP05622 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.46■□□□□ 0.87
PdgfrbP05622 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PdgfrbP05622 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
PdgfrbP05622 Gm9870-201ENSMUST00000063874 645 ntBASIC20.46■□□□□ 0.87
PdgfrbP05622 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PdgfrbP05622 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PdgfrbP05622 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PdgfrbP05622 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PdgfrbP05622 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PdgfrbP05622 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.45■□□□□ 0.86
PdgfrbP05622 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PdgfrbP05622 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PdgfrbP05622 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PdgfrbP05622 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PdgfrbP05622 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PdgfrbP05622 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PdgfrbP05622 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms