Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Col4a1P02463 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC25.55■■□□□ 1.68
Col4a1P02463 Smad6-203ENSMUST00000179458 273 ntBASIC25.55■■□□□ 1.68
Col4a1P02463 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Col4a1P02463 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Col4a1P02463 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Col4a1P02463 Gm10129-202ENSMUST00000193100 1316 ntBASIC25.55■■□□□ 1.68
Col4a1P02463 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Col4a1P02463 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Col4a1P02463 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Col4a1P02463 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Col4a1P02463 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Col4a1P02463 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Col4a1P02463 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Col4a1P02463 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Col4a1P02463 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Col4a1P02463 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Col4a1P02463 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC25.53■■□□□ 1.68
Col4a1P02463 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC25.53■■□□□ 1.68
Col4a1P02463 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Col4a1P02463 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Col4a1P02463 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Col4a1P02463 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC25.52■■□□□ 1.68
Col4a1P02463 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Col4a1P02463 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Col4a1P02463 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Col4a1P02463 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Col4a1P02463 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Col4a1P02463 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Col4a1P02463 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Col4a1P02463 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Col4a1P02463 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC25.52■■□□□ 1.68
Col4a1P02463 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC25.52■■□□□ 1.68
Col4a1P02463 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Col4a1P02463 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
Col4a1P02463 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Col4a1P02463 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Col4a1P02463 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Col4a1P02463 Gm10493-201ENSMUST00000097270 612 ntBASIC25.51■■□□□ 1.67
Col4a1P02463 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Col4a1P02463 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Col4a1P02463 Gm7291-201ENSMUST00000199147 382 ntBASIC25.5■■□□□ 1.67
Col4a1P02463 Gm43060-201ENSMUST00000200621 289 ntBASIC25.5■■□□□ 1.67
Col4a1P02463 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC25.5■■□□□ 1.67
Col4a1P02463 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Col4a1P02463 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Col4a1P02463 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC25.49■■□□□ 1.67
Col4a1P02463 Gm27045-201ENSMUST00000182145 1402 ntBASIC25.49■■□□□ 1.67
Col4a1P02463 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Col4a1P02463 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Col4a1P02463 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Col4a1P02463 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Col4a1P02463 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC25.48■■□□□ 1.67
Col4a1P02463 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
Col4a1P02463 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC25.48■■□□□ 1.67
Col4a1P02463 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC25.48■■□□□ 1.67
Col4a1P02463 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
Col4a1P02463 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Col4a1P02463 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Col4a1P02463 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC25.48■■□□□ 1.67
Col4a1P02463 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC25.48■■□□□ 1.67
Col4a1P02463 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Col4a1P02463 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Col4a1P02463 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Col4a1P02463 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Col4a1P02463 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Col4a1P02463 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Col4a1P02463 AC099934.2-201ENSMUST00000196389 70 ntBASIC25.47■■□□□ 1.67
Col4a1P02463 AC156953.1-201ENSMUST00000196953 70 ntBASIC25.47■■□□□ 1.67
Col4a1P02463 AC157822.2-201ENSMUST00000200291 70 ntBASIC25.47■■□□□ 1.67
Col4a1P02463 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Col4a1P02463 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Col4a1P02463 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC25.46■■□□□ 1.67
Col4a1P02463 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC25.46■■□□□ 1.67
Col4a1P02463 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC25.46■■□□□ 1.67
Col4a1P02463 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC25.46■■□□□ 1.67
Col4a1P02463 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Col4a1P02463 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Col4a1P02463 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC25.45■■□□□ 1.67
Col4a1P02463 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC25.45■■□□□ 1.67
Col4a1P02463 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
Col4a1P02463 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC25.45■■□□□ 1.67
Col4a1P02463 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC25.45■■□□□ 1.67
Col4a1P02463 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
Col4a1P02463 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC25.45■■□□□ 1.67
Col4a1P02463 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC25.45■■□□□ 1.66
Col4a1P02463 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Col4a1P02463 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Col4a1P02463 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Col4a1P02463 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC25.44■■□□□ 1.66
Col4a1P02463 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Col4a1P02463 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Col4a1P02463 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC25.44■■□□□ 1.66
Col4a1P02463 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Col4a1P02463 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Col4a1P02463 Gm10033-202ENSMUST00000211874 928 ntBASIC25.44■■□□□ 1.66
Col4a1P02463 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Col4a1P02463 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Col4a1P02463 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Col4a1P02463 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms